RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 IGKV3-7A0A075B6H7 116 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 A0A0B4J293 547 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 IGHV3-66A0A0C4DH42 116 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 GPR31O00270 319 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 MT-CO2P00403 227 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 IFNA6P05013 189 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 FGF2P09038 288 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 CBX5P45973 191 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 TFPI2P48307 235 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 FAM106AQ4KMX7 169 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 Q6ZRM9 215 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 TSPAN14Q8NG11 270 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 OR52I2Q8NH67 350 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 BSCL2Q96G97 398 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-213ENST00000519848 OR10C1Q96KK4 312 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 ABHD1Q96SE0 405 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 SPAG8Q99932 426 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-213ENST00000519848 SRSF8Q9BRL6 282 aaKnown RBP6.33□□□□□ -1.4
PABPC1-213ENST00000519848 DIABLOQ9NR28 239 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 PRR13Q9NZ81 148 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 COMMD3Q9UBI1 195 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 SMPXQ9UHP9 88 aa6.33□□□□□ -1.4
PABPC1-213ENST00000519848 DNAH10Q8IVF4 4471 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 NDUFA4O00483 81 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 DEFB4AO15263 64 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 NUPL2O15504 423 aaKnown RBP6.32□□□□□ -1.4
PABPC1-213ENST00000519848 RNASE2P10153 161 aaKnown RBP6.32□□□□□ -1.4
PABPC1-213ENST00000519848 C4BPBP20851 252 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 PRSS3P35030 304 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 RANBP1P43487 201 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 PPP5CP53041 499 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 ELLP55199 621 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-213ENST00000519848 PRCDQ00LT1 54 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 SP6Q3SY56 376 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 SLC16A13Q7RTY0 426 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 GBGT1Q8N5D6 347 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 ZNF114Q8NC26 417 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 ST8SIA2Q92186 375 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 MARC2Q969Z3 335 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 RNF183Q96D59 192 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 RHPN1-AS1Q9BWJ2 59 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 Q9H521 79 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 UFC1Q9Y3C8 167 aa6.32□□□□□ -1.4
PABPC1-213ENST00000519848 ST8SIA3O43173 380 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 NXPH3O95157 252 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 GABARAPO95166 117 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 DHFRP00374 187 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 CD3DP04234 171 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 TAS2R46P59540 309 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 ERVK-16P61578 105 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 Q56UQ5 140 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 TOMM20LQ6UXN7 152 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 CADM3Q8N126 398 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 OR1P1Q8NH06 330 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 CD300LFQ8TDQ1 290 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 S100A16Q96FQ6 103 aaKnown RBP6.31□□□□□ -1.4
PABPC1-213ENST00000519848 SCRT1Q9BWW7 348 aa6.31□□□□□ -1.4
PABPC1-213ENST00000519848 NXF2Q9GZY0 626 aaKnown RBP6.31□□□□□ -1.4
PABPC1-213ENST00000519848 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 CXorf65A6NEN9 183 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 C15orf62A8K5M9 175 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 SPRY2O43597 315 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 IGKV1-17P01599 117 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 APOA1P02647 267 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 RCVRNP35243 200 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 UCP3P55916 312 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 DEFB1P60022 68 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 NANOS2P60321 138 aaKnown RBP6.3□□□□□ -1.4
PABPC1-213ENST00000519848 SPCS2Q15005 226 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 BSXQ3C1V8 233 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 LEMD1Q68G75 181 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 RBPMS2Q6ZRY4 209 aaKnown RBP6.3□□□□□ -1.4
PABPC1-213ENST00000519848 Q6ZWC4 215 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 OR13C8Q8NGS7 320 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 OR6F1Q8NGZ6 308 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 PINX1Q96BK5 328 aaKnown RBP6.3□□□□□ -1.4
PABPC1-213ENST00000519848 VSIRQ9H7M9 311 aa6.3□□□□□ -1.4
PABPC1-213ENST00000519848 DNAH6Q9C0G6 4158 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 A0A087WXM4 84 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 K7EMT4 169 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 DFFBO76075 338 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 JTBO76095 146 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 LY6G6CO95867 125 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 HOXA5P20719 270 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 PIGPP57054 158 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 RND3P61587 244 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 MEF2DQ14814 521 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 THOC7Q6I9Y2 204 aaKnown RBP6.29□□□□□ -1.4
PABPC1-213ENST00000519848 SPSB3Q6PJ21 355 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 CEMP1Q6PRD7 247 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-213ENST00000519848 Q8NAQ8 132 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 TMEM116Q8NCL8 245 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 TMEM230Q96A57 120 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 PRNDQ9UKY0 176 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 TP53TG1Q9Y2A0 90 aa6.29□□□□□ -1.4
PABPC1-213ENST00000519848 KNCNA6PVL3 124 aa6.28□□□□□ -1.4
PABPC1-213ENST00000519848 CTDSP2O14595 271 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms