RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 ALMS1Q8TCU4 4167 aa9.18□□□□□ -0.94
CSMD1-205ENST00000519623 GALNT14Q96FL9 552 aa9.18□□□□□ -0.94
CSMD1-205ENST00000519623 MAP6D1Q9H9H5 199 aa9.18□□□□□ -0.94
CSMD1-205ENST00000519623 INS-IGF2F8WCM5 200 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 CD3DP04234 171 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 ATF4P18848 351 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-205ENST00000519623 ZNF124Q15973 351 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 CTF1Q16619 201 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 SPINK9Q5DT21 86 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 PVRIGQ6DKI7 326 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 TOMM20LQ6UXN7 152 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 LILRB2Q8N423 598 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 OR52I2Q8NH67 350 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 PINX1Q96BK5 328 aaKnown RBP9.17□□□□□ -0.94
CSMD1-205ENST00000519623 ZNF486Q96H40 463 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-205ENST00000519623 TP53RKQ96S44 253 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 ABHD1Q96SE0 405 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 NAA50Q9GZZ1 169 aaKnown RBP9.17□□□□□ -0.94
CSMD1-205ENST00000519623 MTFP1Q9UDX5 166 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 BIRC6Q9NR09 4857 aa9.17□□□□□ -0.94
CSMD1-205ENST00000519623 IGHV3OR16-13A0A075B7E8 117 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 IGHV3-74A0A0B4J1X5 117 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 CXorf65A6NEN9 183 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 FAM25AB3EWG3 89 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 FAM25CB3EWG5 89 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 FAM25GB3EWG6 89 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 GNG7O60262 68 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 PGAM2P15259 253 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 CMC4P56277 68 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-205ENST00000519623 PIGPP57054 158 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 PMS2P11Q13670 270 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 RNASE12Q5GAN4 147 aaKnown RBP9.16□□□□□ -0.94
CSMD1-205ENST00000519623 MZT2AQ6P582 158 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 CEMP1Q6PRD7 247 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-205ENST00000519623 ARRDC1Q8N5I2 433 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 LINC00476Q8WZB0 136 aa9.16□□□□□ -0.94
CSMD1-205ENST00000519623 IGKV3-7A0A075B6H7 116 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 C3orf85A0A1B0GTC6 90 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 ST8SIA3O43173 380 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 TMEM50AO95807 157 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 APOHP02749 345 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-205ENST00000519623 ZNF182P17025 639 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-205ENST00000519623 ETV6P41212 452 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 TFPI2P48307 235 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 RNASE10Q5GAN6 216 aaKnown RBP9.15□□□□□ -0.94
CSMD1-205ENST00000519623 GBGT1Q8N5D6 347 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 DUSP18Q8NEJ0 188 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 OR4D10Q8NGI6 311 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 TERB2Q8NHR7 220 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 ST8SIA2Q92186 375 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 CSTL1Q9H114 145 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 VSIRQ9H7M9 311 aa9.15□□□□□ -0.94
CSMD1-205ENST00000519623 A0A1B0GU03 582 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 NUPR2A6NF83 97 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 GABARAPO95166 117 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 CD74P04233 296 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 RNASE2P10153 161 aaKnown RBP9.14□□□□□ -0.95
CSMD1-205ENST00000519623 TBPP20226 339 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 SNCAP37840 140 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 NPBWR1P48145 328 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 MLANAQ16655 118 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 SP6Q3SY56 376 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 Q6ZRM9 215 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 TCF24Q7RTU0 167 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 TMEM229BQ8NBD8 167 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 AP3S1Q92572 193 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 ZFAND3Q9H8U3 227 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 MRPL36Q9P0J6 103 aaKnown RBP9.14□□□□□ -0.95
CSMD1-205ENST00000519623 EXTL2Q9UBQ6 330 aa9.14□□□□□ -0.95
CSMD1-205ENST00000519623 PUS1Q9Y606 427 aaKnown RBP eCLIP9.14□□□□□ -0.95
CSMD1-205ENST00000519623 A0A0G2JRQ6 117 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 MPTX1A8MV57 137 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 DFFBO76075 338 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 ATG12O94817 140 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 LY6G6CO95867 125 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 IFNA17P01571 189 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 CD5P06127 495 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 SMIM18P0DKX4 95 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 UCP1P25874 307 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 PAFAH1B2P68402 229 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 ZNF600Q6ZNG1 722 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 SLC35G3Q8N808 338 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 OR13C8Q8NGS7 320 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 ZFAND1Q8TCF1 268 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 GINS3Q9BRX5 216 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 C6orf62Q9GZU0 229 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-205ENST00000519623 MS4A6AQ9H2W1 248 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 MIXL1Q9H2W2 232 aa9.13□□□□□ -0.95
CSMD1-205ENST00000519623 FNDC4Q9H6D8 234 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-205ENST00000519623 AGRNO00468 2067 aa9.12□□□□□ -0.95
CSMD1-205ENST00000519623 IGHV3-66A0A0C4DH42 116 aa9.12□□□□□ -0.95
CSMD1-205ENST00000519623 RAB3DO95716 219 aa9.12□□□□□ -0.95
CSMD1-205ENST00000519623 AKR1C2P52895 323 aa9.12□□□□□ -0.95
CSMD1-205ENST00000519623 PPP5CP53041 499 aa9.12□□□□□ -0.95
CSMD1-205ENST00000519623 SUB1P53999 127 aaKnown RBP eCLIP9.12□□□□□ -0.95
CSMD1-205ENST00000519623 BSXQ3C1V8 233 aa9.12□□□□□ -0.95
CSMD1-205ENST00000519623 AARDQ4LEZ3 155 aa9.12□□□□□ -0.95
CSMD1-205ENST00000519623 GPR107Q5VW38 600 aa9.12□□□□□ -0.95
CSMD1-205ENST00000519623 MARCH1Q8TCQ1 289 aa9.12□□□□□ -0.95
CSMD1-205ENST00000519623 C15orf40Q8WUR7 153 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms