RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 RAB3BP20337 219 aa8.39□□□□□ -1.07
TMEM55A-202ENST00000518359 OR10A3P58181 314 aa8.39□□□□□ -1.07
TMEM55A-202ENST00000518359 STXBP6Q8NFX7 210 aa8.39□□□□□ -1.07
TMEM55A-202ENST00000518359 SCRT1Q9BWW7 348 aa8.39□□□□□ -1.07
TMEM55A-202ENST00000518359 RNF167Q9H6Y7 350 aa8.39□□□□□ -1.07
TMEM55A-202ENST00000518359 FKBP11Q9NYL4 201 aa8.39□□□□□ -1.07
TMEM55A-202ENST00000518359 IGHV3-66A0A0C4DH42 116 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 I3L2K1 104 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 SPART-AS1P0CW21 52 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 FXYD4P59646 89 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 NUTF2P61970 127 aaKnown RBP8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 ACTL10Q5JWF8 245 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 TOMM20LQ6UXN7 152 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 TPRA1Q86W33 373 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 CSNK1G2-AS1Q8NCQ2 148 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 BEST4Q8NFU0 473 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 PRNDQ9UKY0 176 aa8.38□□□□□ -1.07
TMEM55A-202ENST00000518359 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 TMEM189A5PLL7 270 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 KNCNA6PVL3 124 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 K7EQG2 157 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 MT-CO2P00403 227 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 APOHP02749 345 aaPredicted RBP8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 NPBWR1P48145 328 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 ZNF600Q6ZNG1 722 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 ZNF818PQ6ZRF7 136 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 ZNF367Q7RTV3 350 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 CADM3Q8N126 398 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 LILRB2Q8N423 598 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 TSPAN14Q8NG11 270 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 PINX1Q96BK5 328 aaKnown RBP8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 MOB3AQ96BX8 217 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 NARS2Q96I59 477 aaKnown RBP8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 TSC22D3Q99576 134 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 MGLLQ99685 303 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 PUS1Q9Y606 427 aaKnown RBP eCLIP8.37□□□□□ -1.07
TMEM55A-202ENST00000518359 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 SSX5O60225 188 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 KRASP01116 189 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 NPPCP23582 126 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 F2RP25116 425 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 FGF9P31371 208 aaPredicted RBP8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 EIF2B2P49770 351 aaKnown RBP8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 FAM3BP58499 235 aaPredicted RBP8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 TNP2Q05952 138 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 KCTD21Q4G0X4 260 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 TMEM17Q86X19 198 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 ZNF114Q8NC26 417 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 ZFAND3Q9H8U3 227 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 NSG2Q9Y328 171 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 TPRKBQ9Y3C4 175 aa8.36□□□□□ -1.07
TMEM55A-202ENST00000518359 RGS10O43665 173 aa8.35□□□□□ -1.07
TMEM55A-202ENST00000518359 IGHV3-48P01763 117 aa8.35□□□□□ -1.07
TMEM55A-202ENST00000518359 G6PCP35575 357 aa8.35□□□□□ -1.07
TMEM55A-202ENST00000518359 HERV-K104P61576 105 aa8.35□□□□□ -1.07
TMEM55A-202ENST00000518359 METTL26Q96S19 204 aa8.35□□□□□ -1.07
TMEM55A-202ENST00000518359 TMED3Q9Y3Q3 217 aa8.35□□□□□ -1.07
TMEM55A-202ENST00000518359 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 SMIM9A6NGZ8 99 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 SCGB2A1O75556 95 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 RLN1P04808 185 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 PTHLHP12272 177 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 LPAR6P43657 344 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 P2RY1P47900 373 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 HOGA1Q86XE5 327 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 DCANP1Q8TF63 244 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 FCAMRQ8WWV6 532 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 NEU1Q99519 415 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 VCXQ9H320 206 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 XCL2Q9UBD3 114 aa8.34□□□□□ -1.07
TMEM55A-202ENST00000518359 HELTA6NFD8 242 aa8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 EMP1P54849 157 aa8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 ERHP84090 104 aaKnown RBP8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 DHRS2Q13268 280 aa8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 PSMG4Q5JS54 123 aa8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 CMTM1Q8IZ96 169 aa8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 RAB40CQ96S21 281 aa8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 NIPSNAP3BQ9BS92 247 aa8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 DAPK2Q9UIK4 370 aa8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 DNAH5Q8TE73 4624 aa8.33□□□□□ -1.08
TMEM55A-202ENST00000518359 A0A1B0GU03 582 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 TRDV1A0A1B0GX56 115 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 NOTOA8MTQ0 251 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 HTN3P15516 51 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 CRYBB3P26998 211 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 GNRHRP30968 328 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 AP2S1P53680 142 aaPredicted RBP8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 SNRPD3P62318 126 aaKnown RBP8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 PRCDQ00LT1 54 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 OXA1LQ15070 435 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 ZNF705AQ6ZN79 300 aaPredicted RBP8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 C6orf223Q8N319 242 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 C15orf53Q8NAA6 179 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 OR5AP2Q8NGF4 316 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 OR4A16Q8NH70 328 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 ATG101Q9BSB4 218 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 DUSP21Q9H596 190 aa8.32□□□□□ -1.08
TMEM55A-202ENST00000518359 RFNGQ9Y644 331 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms