RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 KRTAP4-1Q9BYQ7 146 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 PARP12Q9H0J9 701 aaKnown RBP1.97□□□□□ -2.09
CPNE3-204ENST00000517862 OR52D1Q9H346 318 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF331Q9NQX6 463 aaPredicted RBP1.97□□□□□ -2.09
CPNE3-204ENST00000517862 TAS2R13Q9NYV9 303 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 ANXA10Q9UJ72 324 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF222Q9UK12 451 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 HHLA2Q9UM44 414 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 PSG11Q9UQ72 335 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 PUS1Q9Y606 427 aaKnown RBP eCLIP1.97□□□□□ -2.09
CPNE3-204ENST00000517862 TRBV6-6A0A0A6YYG2 114 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 A0A1B0GX12 115 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 RBFOX3A6NFN3 312 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 GGT3PA6NGU5 568 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 TNFRSF11BO00300 401 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ITGB1BP1O14713 200 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 NDUFS5O43920 106 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 MPZL2O60487 215 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 SLC22A5O76082 557 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 VAMP5O95183 116 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 KLHL2O95198 593 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 PET100P0DJ07 73 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 MIFP14174 115 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 AZU1P20160 251 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 M6PRP20645 277 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 SPRR2EP22531 72 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 FKBP2P26885 142 aaKnown RBP1.96□□□□□ -2.1
CPNE3-204ENST00000517862 SPRR2BP35325 72 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 SPRR2AP35326 72 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 TGM4P49221 684 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 CDC34P49427 236 aaPredicted RBP1.96□□□□□ -2.1
CPNE3-204ENST00000517862 GDI2P50395 445 aaKnown RBP1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ERFP50548 548 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 PSMD7P51665 324 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 PLTPP55058 493 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 TAS2R31P59538 309 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 DSTNP60981 165 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 DEFB114Q30KQ6 69 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 SLC36A2Q495M3 483 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 CDNFQ49AH0 187 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ACTBL2Q562R1 376 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 MPV17L2Q567V2 206 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 SYT6Q5T7P8 510 aaPredicted RBP1.96□□□□□ -2.1
CPNE3-204ENST00000517862 TEX36Q5VZQ5 186 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 NANOGP8Q6NSW7 305 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 CD200R1LQ6Q8B3 271 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 PCP2Q8IVA1 136 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 C11orf53Q8IXP5 236 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 SLC22A24Q8N4F4 322 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 CCNYL1Q8N7R7 359 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 Q8N976 141 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF738Q8NE65 137 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 OR9A2Q8NGT5 310 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 OR6N1Q8NGY5 312 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ZFAND1Q8TCF1 268 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 C15orf40Q8WUR7 153 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 DCAKDQ8WVC6 231 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ZIM3Q96PE6 472 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 METTL26Q96S19 204 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF251Q9BRH9 671 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 SLC25A39Q9BZJ4 359 aaPredicted RBP1.96□□□□□ -2.1
CPNE3-204ENST00000517862 SHCBP1LQ9BZQ2 653 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 FGF23Q9GZV9 251 aaPredicted RBP1.96□□□□□ -2.1
CPNE3-204ENST00000517862 NXF2Q9GZY0 626 aaKnown RBP1.96□□□□□ -2.1
CPNE3-204ENST00000517862 HDHD2Q9H0R4 259 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ABCB9Q9NP78 766 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF780BQ9Y6R6 833 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 ENPP4Q9Y6X5 453 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 KIF25-AS1Q9Y6Z4 181 aa1.96□□□□□ -2.1
CPNE3-204ENST00000517862 PSPHP1O15172 72 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 GATBO75879 557 aaKnown RBP1.95□□□□□ -2.1
CPNE3-204ENST00000517862 HAND1O96004 215 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 RLN2P04090 185 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 MMP7P09237 267 aaPredicted RBP1.95□□□□□ -2.1
CPNE3-204ENST00000517862 CGB3P0DN86 165 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 CCL3L1P16619 93 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 ESRRGP62508 458 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 IFITM3Q01628 133 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 CD164Q04900 197 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 SYCNQ0VAF6 134 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 NAB1Q13506 487 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 RBM48Q5RL73 367 aaKnown RBP1.95□□□□□ -2.1
CPNE3-204ENST00000517862 FAM162BQ5T6X4 162 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 SLC48A1Q6P1K1 146 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 PRNTQ86SH4 94 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 C1orf158Q8N1D5 194 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 LINC00337Q8N6G1 96 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 COQ8AQ8NI60 647 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 FAM104AQ969W3 186 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 DDIT4LQ96D03 193 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 FMC1Q96HJ9 113 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF414Q96IQ9 312 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 TMEM56Q96MV1 263 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 FAM210AQ96ND0 272 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 CAMK2N2Q96S95 79 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 DCUN1D5Q9BTE7 237 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 EMC6Q9BV81 110 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 ABCG5Q9H222 651 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 FBXL15Q9H469 300 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 C12orf4Q9NQ89 552 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms