RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 SEC22CQ9BRL7 303 aa11.18□□□□□ -0.62
SCARNA21-201ENST00000517026 MCRIP2Q9BUT9 160 aaKnown RBP11.18□□□□□ -0.62
SCARNA21-201ENST00000517026 ZC4H2Q9NQZ6 224 aa11.18□□□□□ -0.62
SCARNA21-201ENST00000517026 THYN1Q9P016 225 aa11.18□□□□□ -0.62
SCARNA21-201ENST00000517026 PITX3O75364 302 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 OR2C1O95371 312 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 DUS4LO95620 317 aaKnown RBP11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 IGHV3-48P01763 117 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 PRB2P02812 416 aaPredicted RBP11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 RNASE2P10153 161 aaKnown RBP11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 RPEL1Q2QD12 228 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 NRARPQ7Z6K4 114 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 ENKURQ8TC29 256 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 VN1R17PQ8TDU5 208 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 SCARB1Q8WTV0 552 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 RBKSQ9H477 322 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 HEYLQ9NQ87 328 aaPredicted RBP11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 HSPB7Q9UBY9 170 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 TMED3Q9Y3Q3 217 aa11.17□□□□□ -0.62
SCARNA21-201ENST00000517026 TRBV7-1A0A0A6YYK4 115 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 PIGBOS1A0A0B4J2F0 54 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 MPTX1A8MV57 137 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 I3L2K1 104 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 GPR183P32249 361 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 ARL3P36405 182 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 KRTAP10-11P60412 298 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 TNFRSF9Q07011 255 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 KPRPQ5T749 579 aaPredicted RBP11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 MITD1Q8WV92 249 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 PINX1Q96BK5 328 aaKnown RBP11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 C21orf62Q9NYP8 219 aa11.16□□□□□ -0.62
SCARNA21-201ENST00000517026 OR2T8A6NH00 312 aa11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 F8W735 103 aaPredicted RBP11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 GGCTO75223 188 aaKnown RBP11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 MT-CO2P00403 227 aa11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 SLC25A6P12236 298 aa11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 BSXQ3C1V8 233 aa11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 UBAC2Q8NBM4 344 aa11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 ZNF431Q8TF32 576 aaPredicted RBP11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 TMEM170AQ8WVE7 144 aa11.15□□□□□ -0.62
SCARNA21-201ENST00000517026 IGHV3-35A0A0C4DH35 117 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 SUB1P53999 127 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 MLANAQ16655 118 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 C9orf66Q5T8R8 295 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 ACSM6Q6P461 480 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 IL34Q6ZMJ4 242 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 UXS1Q8NBZ7 420 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 DUSP18Q8NEJ0 188 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 DTD1Q8TEA8 209 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 GPR61Q9BZJ8 451 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 MAGT1Q9H0U3 335 aa11.14□□□□□ -0.63
SCARNA21-201ENST00000517026 RYR3Q15413 4870 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 SAP30O75446 220 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 IFNA21P01568 189 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 IAPPP10997 89 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 SPNP16150 400 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 HTR2BP41595 481 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 DEFA1P59665 94 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 DEFA3P59666 94 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 TATDN3Q17R31 274 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 Q56UQ5 140 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 PLET1Q6UQ28 207 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 HAPLN4Q86UW8 402 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 SLC24A4Q8NFF2 622 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 OR9G4Q8NGQ1 327 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 CHRDL1Q9BU40 450 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 HIPK2Q9H2X6 1198 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 FNDC4Q9H6D8 234 aaPredicted RBP11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 CACFD1Q9UGQ2 172 aa11.13□□□□□ -0.63
SCARNA21-201ENST00000517026 CCSO14618 274 aa11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 TGOLN2O43493 480 aa11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 IL5P05113 134 aa11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 MFAP4P55083 255 aa11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 C2orf83Q53S99 150 aa11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 C12orf45Q8N5I9 185 aaPredicted RBP11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 OR10C1Q96KK4 312 aa11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 ELOVL1Q9BW60 279 aa11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 DNAH3Q8TD57 4116 aa11.12□□□□□ -0.63
SCARNA21-201ENST00000517026 ZNF320A2RRD8 509 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 INMT-MINDY4F8WBC2 141 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 IFNA10P01566 189 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 CSN3P07498 182 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 CTSGP08311 255 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 EDN2P20800 178 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 NPY1RP25929 384 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 ADMP35318 185 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 EGFEM1PQ0D2K5 195 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 IAH1Q2TAA2 248 aaPredicted RBP11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 UNQ9165/PRO28630Q6UXU0 137 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 GPHB5Q86YW7 130 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 OR4D5Q8NGN0 318 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 BSCL2Q96G97 398 aaPredicted RBP11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 OR4C12Q96R67 309 aa11.11□□□□□ -0.63
SCARNA21-201ENST00000517026 FAM90A26D6RGX4 464 aa11.1□□□□□ -0.63
SCARNA21-201ENST00000517026 SYNGR2O43760 224 aa11.1□□□□□ -0.63
SCARNA21-201ENST00000517026 OPRK1P41145 380 aa11.1□□□□□ -0.63
SCARNA21-201ENST00000517026 POLR2GP62487 172 aaKnown RBP eCLIP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms