RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 ZNF439Q8NDP4 499 aa0.59□□□□□ -2.31
RNU6-1041P-201ENST00000516254 OR8J2Q8NGG1 315 aa0.59□□□□□ -2.31
RNU6-1041P-201ENST00000516254 OR4C6Q8NH72 309 aa0.59□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TSPAN32Q96QS1 320 aa0.59□□□□□ -2.31
RNU6-1041P-201ENST00000516254 MRPL57Q9BQC6 102 aaKnown RBP0.59□□□□□ -2.31
RNU6-1041P-201ENST00000516254 ULBP3Q9BZM4 244 aa0.59□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TRABDQ9H4I3 376 aa0.59□□□□□ -2.31
RNU6-1041P-201ENST00000516254 SLC39A9Q9NUM3 307 aa0.59□□□□□ -2.31
RNU6-1041P-201ENST00000516254 MRPL27Q9P0M9 148 aaKnown RBP0.59□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TTC21AQ8NDW8 1320 aa0.59□□□□□ -2.32
RNU6-1041P-201ENST00000516254 RTL1A6NKG5 1358 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 KIF24Q5T7B8 1368 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 FCGBPQ9Y6R7 5405 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 SETD5Q9C0A6 1442 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CUL9Q8IWT3 2517 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TRAV14DV4A0A0A6YYC5 116 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 FAAHO00519 579 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 FADS1O60427 444 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CLPSP04118 112 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 BAALC-AS2P0C853 105 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 UBBP0CG47 229 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 SMIM10L2AP0DMW4 78 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 SMIM10L2BP0DMW5 78 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 S100A4P26447 101 aaKnown RBP0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 RPL5P46777 297 aaKnown RBP0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 AP3S2P59780 193 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 RUNX1Q01196 453 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 IAH1Q2TAA2 248 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 AKIRIN2Q53H80 203 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 KHDC3LQ587J8 217 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TEX36Q5VZQ5 186 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 LCN15Q6UWW0 184 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 KRT222Q8N1A0 295 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 HIST3H2BBQ8N257 126 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 Q8N2B8 174 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 OR4E2Q8NGC2 313 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 OR5B17Q8NGF7 314 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 OR2T4Q8NH00 348 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TERB2Q8NHR7 220 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 H1FXQ92522 213 aaKnown RBP0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 ITFG2Q969R8 447 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 C2orf50Q96LR7 162 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TRIM4Q9C037 500 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CCDC90BQ9GZT6 254 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 RNF122Q9H9V4 155 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 ZFHX2Q9C0A1 2572 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 NEO1Q92859 1461 aa0.58□□□□□ -2.32
RNU6-1041P-201ENST00000516254 MTUS2Q5JR59 1369 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 FN1P02751 2386 aaKnown RBP0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 WRNQ14191 1432 aaPredicted RBP eCLIP0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 A0A087WX48 190 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TRAV26-2A0A0B4J265 109 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 OR4C46A6NHA9 309 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 HCRTO43612 131 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 E2F6O75461 281 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 RNASE3P12724 160 aaKnown RBP0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 MIFP14174 115 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 BRS3P32247 399 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 ZNF846Q147U1 533 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 RHEBQ15382 184 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 SPA17Q15506 151 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 KCNJ8Q15842 424 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 DEFB115Q30KQ5 88 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TMEM97Q5BJF2 176 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 OOSP2Q86WS3 158 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 SIGLECL1Q8N7X8 197 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 GDPD1Q8N9F7 314 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 ZNF565Q8N9K5 539 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CT55Q8WUE5 264 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 AQP3Q92482 292 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 KLK6Q92876 244 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 PPP1R14BQ96C90 147 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 C8orf76Q96K31 380 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 SLC50A1Q9BRV3 221 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TMEM147Q9BVK8 224 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 DCSTAMPQ9H295 470 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 C11orf68Q9H3H3 251 aaKnown RBP0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 UCK1Q9HA47 277 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CMTM6Q9NX76 183 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TAS2R4Q9NYW5 299 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 SLC22A13Q9Y226 551 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 ERGIC3Q9Y282 383 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 PTPRSQ13332 1948 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 MYO3BQ8WXR4 1341 aa0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 RP1L1Q8IWN7 2480 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TGIF2-C20orf24A0A0A6YYL0 155 aa0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 C7orf71A4D174 169 aa0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 TMEM212A6NML5 194 aa0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 GEMIN2O14893 280 aaKnown RBP0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 HYPMO75409 117 aa0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 PROSCO94903 275 aa0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 HAND1O96004 215 aa0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CTSDP07339 412 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 ASAH2BP0C7U1 165 aa0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 PPIBP23284 216 aaKnown RBP0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 ANP32AP39687 249 aaKnown RBP0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CDKN2CP42773 168 aa0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CDC42P60953 191 aa0.56□□□□□ -2.32
RNU6-1041P-201ENST00000516254 CCL7P80098 99 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms