RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 DIABLOQ9NR28 239 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 DDX18Q9NVP1 670 aaKnown RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 OR5V1Q9UGF6 321 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 DKKL1Q9UK85 242 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 APLNQ9ULZ1 77 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 ASB4Q9Y574 426 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 DNAH8Q96JB1 4490 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 SSPOA2VEC9 5147 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 IGLV3-9A0A075B6K5 115 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 IGKV1D-37A0A075B6S9 117 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 IGHV1-69-2A0A0G2JMI3 117 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 OR5H14A6NHG9 310 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 H3BQV1 296 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 H3BUX3 64 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 M0R233 179 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 PSMD12O00232 456 aaPredicted RBP1.28□□□□□ -2.2
LINC01088-211ENST00000515597 SYNGR1O43759 233 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 SH2D1AO60880 128 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 P0DMU3 169 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 FAM231AP0DMU4 169 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 FAM231CP0DMU5 169 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 PSKH1P11801 424 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 UCHL3P15374 230 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 SPNP16150 400 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 KDELR1P24390 212 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 RAB25P57735 213 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 DSTNP60981 165 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 HAMPP81172 84 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 STX5Q13190 355 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 KLRD1Q13241 179 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 CASP8Q14790 479 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 DEFB136Q30KP8 78 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 TMEM176BQ3YBM2 270 aaPredicted RBP1.28□□□□□ -2.2
LINC01088-211ENST00000515597 ACTBL2Q562R1 376 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 SPIN4Q56A73 249 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 CCDC122Q5T0U0 273 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 NXNL2Q5VZ03 156 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 DCUN1D2Q6PH85 259 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 PID1Q7Z2X4 250 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 GAPTQ8N292 157 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 FER1L6-AS1Q8NA97 138 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 OR6N2Q8NGY6 317 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 CCL17Q92583 94 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 ANP32BQ92688 251 aaKnown RBP1.28□□□□□ -2.2
LINC01088-211ENST00000515597 FMC1Q96HJ9 113 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 NXF2Q9GZY0 626 aaKnown RBP1.28□□□□□ -2.2
LINC01088-211ENST00000515597 OR2D2Q9H210 308 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 GAL3ST2Q9H3Q3 398 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 DYNLRB1Q9NP97 96 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 ACOT13Q9NPJ3 140 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 RPRD1BQ9NQG5 326 aaKnown RBP1.28□□□□□ -2.2
LINC01088-211ENST00000515597 SDHAF2Q9NX18 166 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 MAT2BQ9NZL9 334 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 RBM12B-AS1Q9P1G2 102 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 HEY1Q9Y5J3 304 aa1.28□□□□□ -2.2
LINC01088-211ENST00000515597 TCRBV4S1A1TA0A5B7 111 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 PGPA6NDG6 321 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 RBFOX3A6NFN3 312 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 TVP23AA6NH52 213 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 CALB1P05937 261 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 TPM1P09493 284 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 SLC35E2BP0CK96 405 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 RPS3P23396 243 aaKnown RBP eCLIP1.27□□□□□ -2.21
LINC01088-211ENST00000515597 S100A2P29034 98 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 EVI2BP34910 448 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 GLRXP35754 106 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 ARF6P62330 175 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 PSG4Q00888 419 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 PLCXD2Q0VAA5 305 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 FOXF1Q12946 379 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 POU6F1Q14863 301 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 PDK2Q15119 407 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 FBXO48Q5FWF7 155 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 LRRN1Q6UXK5 716 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 ASCL4Q6XD76 172 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 NIT1Q86X76 327 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 ST13P4Q8IZP2 240 aaPredicted RBP1.27□□□□□ -2.21
LINC01088-211ENST00000515597 DRAXINQ8NBI3 349 aaPredicted RBP1.27□□□□□ -2.21
LINC01088-211ENST00000515597 OR4K17Q8NGC6 315 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 MFSD8Q8NHS3 518 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 GPR119Q8TDV5 335 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 BLNKQ8WV28 456 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 SKA2Q8WVK7 121 aaPredicted RBP1.27□□□□□ -2.21
LINC01088-211ENST00000515597 NELFBQ8WX92 580 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 HIST1H2BAQ96A08 127 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 CMBLQ96DG6 245 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 ADTRPQ96IZ2 230 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 ARL5BQ96KC2 179 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 EBNA1BP2Q99848 306 aaKnown RBP1.27□□□□□ -2.21
LINC01088-211ENST00000515597 APOL4Q9BPW4 351 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 SLC25A31Q9H0C2 315 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 TAAR3PQ9P1P4 343 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 KLK5Q9Y337 293 aaPredicted RBP1.27□□□□□ -2.21
LINC01088-211ENST00000515597 TNCP24821 2201 aa1.27□□□□□ -2.21
LINC01088-211ENST00000515597 TRAV8-3A0A0A6YYJ7 113 aa1.26□□□□□ -2.21
LINC01088-211ENST00000515597 ZNF879B4DU55 563 aa1.26□□□□□ -2.21
LINC01088-211ENST00000515597 CLDN25C9JDP6 229 aa1.26□□□□□ -2.21
LINC01088-211ENST00000515597 POLR3GO15318 223 aaPredicted RBP1.26□□□□□ -2.21
LINC01088-211ENST00000515597 SPOPO43791 374 aa1.26□□□□□ -2.21
LINC01088-211ENST00000515597 GMDSO60547 372 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms