RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 MYCNOSP40205 109 aa11.68□□□□□ -0.54
PDCD6-211ENST00000515587 NKX2-1P43699 371 aaPredicted RBP11.68□□□□□ -0.54
PDCD6-211ENST00000515587 TREML4Q6UXN2 200 aa11.68□□□□□ -0.54
PDCD6-211ENST00000515587 MISP3Q96FF7 219 aa11.68□□□□□ -0.54
PDCD6-211ENST00000515587 OR10C1Q96KK4 312 aa11.68□□□□□ -0.54
PDCD6-211ENST00000515587 CIB3Q96Q77 187 aaPredicted RBP11.68□□□□□ -0.54
PDCD6-211ENST00000515587 MAGT1Q9H0U3 335 aa11.68□□□□□ -0.54
PDCD6-211ENST00000515587 TRBV7-1A0A0A6YYK4 115 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 ANKRD34BA5PLL1 514 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 CCL24O00175 119 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 SYNGR2O43760 224 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 IFNA10P01566 189 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 RNASE2P10153 161 aaKnown RBP11.67□□□□□ -0.54
PDCD6-211ENST00000515587 ATP5IP56385 69 aaPredicted RBP11.67□□□□□ -0.54
PDCD6-211ENST00000515587 RPP30P78346 268 aaKnown RBP11.67□□□□□ -0.54
PDCD6-211ENST00000515587 ZNF616Q08AN1 781 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 DEFB136Q30KP8 78 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 ZNF343Q6P1L6 599 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 SLC24A4Q8NFF2 622 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 OR11H1Q8NG94 326 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 OR4D5Q8NGN0 318 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 OR1N2Q8NGR9 330 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 VN1R17PQ8TDU5 208 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 RAX2Q96IS3 184 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 ALG5Q9Y673 324 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 U3KQ87 197 aa11.67□□□□□ -0.54
PDCD6-211ENST00000515587 C7orf66A4D0T2 115 aa11.66□□□□□ -0.54
PDCD6-211ENST00000515587 GOSR2O14653 212 aa11.66□□□□□ -0.54
PDCD6-211ENST00000515587 HSPB1P04792 205 aaKnown RBP11.66□□□□□ -0.54
PDCD6-211ENST00000515587 OR8U8P0C7N1 319 aa11.66□□□□□ -0.54
PDCD6-211ENST00000515587 IAPPP10997 89 aa11.66□□□□□ -0.54
PDCD6-211ENST00000515587 NPY1RP25929 384 aa11.66□□□□□ -0.54
PDCD6-211ENST00000515587 MFAP2P55001 183 aa11.66□□□□□ -0.54
PDCD6-211ENST00000515587 ID3Q02535 119 aa11.66□□□□□ -0.54
PDCD6-211ENST00000515587 OXA1LQ15070 435 aa11.66□□□□□ -0.54
PDCD6-211ENST00000515587 RANGRFQ9HD47 186 aaPredicted RBP11.66□□□□□ -0.54
PDCD6-211ENST00000515587 PEF1Q9UBV8 284 aaKnown RBP11.66□□□□□ -0.54
PDCD6-211ENST00000515587 DMRT1Q9Y5R6 373 aa11.66□□□□□ -0.54
PDCD6-211ENST00000515587 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.65□□□□□ -0.54
PDCD6-211ENST00000515587 LINC01619G3V211 115 aa11.65□□□□□ -0.54
PDCD6-211ENST00000515587 BSXQ3C1V8 233 aa11.65□□□□□ -0.54
PDCD6-211ENST00000515587 C2orf83Q53S99 150 aa11.65□□□□□ -0.54
PDCD6-211ENST00000515587 PINX1Q96BK5 328 aaKnown RBP11.65□□□□□ -0.54
PDCD6-211ENST00000515587 DUX3Q96PT4 197 aa11.65□□□□□ -0.54
PDCD6-211ENST00000515587 RPS10-NUDT3A0A1W2PQS6 291 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 MFSD2BA6NFX1 497 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 SSSCA1O60232 199 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 MT-CO2P00403 227 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 IGHV3-23P01764 117 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 ZP3P21754 424 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 POLR2GP62487 172 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDCD6-211ENST00000515587 RAB11AP62491 216 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 CYCSP99999 105 aaKnown RBP11.64□□□□□ -0.55
PDCD6-211ENST00000515587 ETV3LQ6ZN32 361 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 RNASEH2CQ8TDP1 164 aaKnown RBP11.64□□□□□ -0.55
PDCD6-211ENST00000515587 GAR1Q9NY12 217 aaKnown RBP11.64□□□□□ -0.55
PDCD6-211ENST00000515587 C21orf62Q9NYP8 219 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 MGAT4CQ9UBM8 478 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 PAIP2BQ9ULR5 123 aaKnown RBP11.64□□□□□ -0.55
PDCD6-211ENST00000515587 S4R3C0 116 aa11.64□□□□□ -0.55
PDCD6-211ENST00000515587 IGHV4OR15-8A0A075B7B6 117 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 A0A087WW49 117 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 IGHV3-21A0A0B4J1V1 117 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 K7EIM0 57 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 L7N2F9 121 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 MBPP02686 304 aaPredicted RBP11.63□□□□□ -0.55
PDCD6-211ENST00000515587 IFNA4P05014 189 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 CD33P20138 364 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 OPRK1P41145 380 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 MFAP4P55083 255 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 VAMP2P63027 116 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 FHL3Q13643 280 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 Q56UQ5 140 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 CLEC19AQ6UXS0 136 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 ZNF502Q8TBZ5 544 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 SCARB1Q8WTV0 552 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 RAB40CQ96S21 281 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 ATP6V0BQ99437 205 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 MED28Q9H204 178 aa11.63□□□□□ -0.55
PDCD6-211ENST00000515587 LSM5Q9Y4Y9 91 aaKnown RBP11.63□□□□□ -0.55
PDCD6-211ENST00000515587 I3L2K1 104 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 SIX6O95475 246 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 CLEC3BP05452 202 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 PVALBP20472 110 aaPredicted RBP11.62□□□□□ -0.55
PDCD6-211ENST00000515587 ARL3P36405 182 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 S100A10P60903 97 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 RPEL1Q2QD12 228 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 PVRIGQ6DKI7 326 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 ETFRF1Q6IPR1 90 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 C11orf87Q6NUJ2 197 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 ACSM6Q6P461 480 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 UBAC2Q8NBM4 344 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 SMIM8Q96KF7 97 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 TXN2Q99757 166 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 PSENENQ9NZ42 101 aa11.62□□□□□ -0.55
PDCD6-211ENST00000515587 STRAPQ9Y3F4 350 aaKnown RBP11.62□□□□□ -0.55
PDCD6-211ENST00000515587 GGCTO75223 188 aaKnown RBP11.61□□□□□ -0.55
PDCD6-211ENST00000515587 SCGB2A1O75556 95 aa11.61□□□□□ -0.55
PDCD6-211ENST00000515587 TRBV12-3P01733 135 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms