RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 UXS1Q8NBZ7 420 aa13.15□□□□□ -0.3
DDR1-277ENST00000515219 ATP6V0BQ99437 205 aa13.15□□□□□ -0.3
DDR1-277ENST00000515219 ZNF436Q9C0F3 470 aaPredicted RBP13.15□□□□□ -0.3
DDR1-277ENST00000515219 UFC1Q9Y3C8 167 aa13.15□□□□□ -0.3
DDR1-277ENST00000515219 COL7A1Q02388 2944 aa13.15□□□□□ -0.3
DDR1-277ENST00000515219 DNAH9Q9NYC9 4486 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 F8W735 103 aaPredicted RBP13.14□□□□□ -0.31
DDR1-277ENST00000515219 I3L2K1 104 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 MT-CO2P00403 227 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 MFAP4P55083 255 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 TMEM187Q14656 261 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 GUCA2BQ16661 112 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 SBSPONQ8IVN8 264 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 GPR146Q96CH1 333 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 GALNT14Q96FL9 552 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 CHRDL1Q9BU40 450 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.14□□□□□ -0.31
DDR1-277ENST00000515219 GAR1Q9NY12 217 aaKnown RBP13.14□□□□□ -0.31
DDR1-277ENST00000515219 PRR13Q9NZ81 148 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 TMEM56-RWDD3S4R434 201 aa13.14□□□□□ -0.31
DDR1-277ENST00000515219 INS-IGF2F8WCM5 200 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 IGHV3-48P01763 117 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 SUB1P53999 127 aaKnown RBP eCLIP13.13□□□□□ -0.31
DDR1-277ENST00000515219 ELLP55199 621 aaPredicted RBP13.13□□□□□ -0.31
DDR1-277ENST00000515219 CD81P60033 236 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 ZNF57Q68EA5 555 aaPredicted RBP13.13□□□□□ -0.31
DDR1-277ENST00000515219 TMED4Q7Z7H5 227 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 MARC2Q969Z3 335 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 WDR89Q96FK6 387 aaPredicted RBP13.13□□□□□ -0.31
DDR1-277ENST00000515219 SRRQ9GZT4 340 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 CACNG5Q9UF02 275 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 MLXQ9UH92 298 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 U3KQK5 164 aa13.13□□□□□ -0.31
DDR1-277ENST00000515219 ZNF785A8K8V0 405 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 NDUFA4O00483 81 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 NUPL2O15504 423 aaKnown RBP13.12□□□□□ -0.31
DDR1-277ENST00000515219 ANXA3P12429 323 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 ADMP35318 185 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 INPP1P49441 399 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 SPCS3P61009 180 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 DEDD2Q8WXF8 326 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 IL22RA2Q969J5 263 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 TXN2Q99757 166 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 C20orf24Q9BUV8 137 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 TUBA4BQ9H853 241 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 NDUFA13Q9P0J0 144 aa13.12□□□□□ -0.31
DDR1-277ENST00000515219 MRPL27Q9P0M9 148 aaKnown RBP13.12□□□□□ -0.31
DDR1-277ENST00000515219 IGHV3OR16-8A0A075B7F1 116 aa13.11□□□□□ -0.31
DDR1-277ENST00000515219 A8MZ25 164 aa13.11□□□□□ -0.31
DDR1-277ENST00000515219 CTSGP08311 255 aa13.11□□□□□ -0.31
DDR1-277ENST00000515219 C8orf88P0DMB2 117 aa13.11□□□□□ -0.31
DDR1-277ENST00000515219 RNASE2P10153 161 aaKnown RBP13.11□□□□□ -0.31
DDR1-277ENST00000515219 SUPT4H1P63272 117 aaKnown RBP13.11□□□□□ -0.31
DDR1-277ENST00000515219 RELQ04864 619 aaPredicted RBP13.11□□□□□ -0.31
DDR1-277ENST00000515219 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
DDR1-277ENST00000515219 OR52E5Q8NH55 327 aa13.11□□□□□ -0.31
DDR1-277ENST00000515219 NEURL2Q9BR09 285 aa13.11□□□□□ -0.31
DDR1-277ENST00000515219 C19orf73Q9NVV2 129 aa13.11□□□□□ -0.31
DDR1-277ENST00000515219 CORTO00230 105 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 ZNF207O43670 478 aaKnown RBP13.1□□□□□ -0.31
DDR1-277ENST00000515219 GNG7O60262 68 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 NXPH3O95157 252 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 CD7P09564 240 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 SULT1A3P0DMM9 295 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 SULT1A4P0DMN0 295 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 FCGR2BP31994 310 aaPredicted RBP13.1□□□□□ -0.31
DDR1-277ENST00000515219 AARDQ4LEZ3 155 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 TRIQKQ629K1 86 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 LGI3Q8N145 548 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 DUSP18Q8NEJ0 188 aa13.1□□□□□ -0.31
DDR1-277ENST00000515219 HEYLQ9NQ87 328 aaPredicted RBP13.1□□□□□ -0.31
DDR1-277ENST00000515219 DAZ1Q9NQZ3 744 aaKnown RBP13.1□□□□□ -0.31
DDR1-277ENST00000515219 A0A0B4J2A0 478 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 CEBPZOSA8MTT3 80 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 YIF1AO95070 293 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 SCAF4O95104 1147 aaKnown RBP13.09□□□□□ -0.31
DDR1-277ENST00000515219 NPBWR1P48145 328 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 SRPXP78539 464 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 BAK1Q16611 211 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 TMEM128Q5BJH2 165 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 RBPMS2Q6ZRY4 209 aaKnown RBP13.09□□□□□ -0.31
DDR1-277ENST00000515219 LYZL2Q7Z4W2 148 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 WWC2-AS2Q96NR7 200 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
DDR1-277ENST00000515219 SHPKQ9UHJ6 478 aa13.09□□□□□ -0.31
DDR1-277ENST00000515219 C15orf62A8K5M9 175 aa13.08□□□□□ -0.32
DDR1-277ENST00000515219 K7EMT4 169 aa13.08□□□□□ -0.32
DDR1-277ENST00000515219 VAMP1P23763 118 aa13.08□□□□□ -0.32
DDR1-277ENST00000515219 OPRK1P41145 380 aa13.08□□□□□ -0.32
DDR1-277ENST00000515219 HTR2BP41595 481 aa13.08□□□□□ -0.32
DDR1-277ENST00000515219 PVRIGQ6DKI7 326 aa13.08□□□□□ -0.32
DDR1-277ENST00000515219 ZMAT4Q9H898 229 aa13.08□□□□□ -0.32
DDR1-277ENST00000515219 CACFD1Q9UGQ2 172 aa13.08□□□□□ -0.32
DDR1-277ENST00000515219 CCR6P51684 374 aa13.07□□□□□ -0.32
DDR1-277ENST00000515219 SMCO1Q147U7 214 aa13.07□□□□□ -0.32
DDR1-277ENST00000515219 NMSQ5H8A3 153 aa13.07□□□□□ -0.32
DDR1-277ENST00000515219 SLC16A13Q7RTY0 426 aa13.07□□□□□ -0.32
DDR1-277ENST00000515219 OR52B4Q8NGK2 314 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms