RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 EEF1AKMT3Q96AZ1 226 aa6.31□□□□□ -1.4
NEDD4-210ENST00000513957 PLEKHA3Q9HB20 300 aa6.31□□□□□ -1.4
NEDD4-210ENST00000513957 PTTG2Q9NZH5 202 aa6.31□□□□□ -1.4
NEDD4-210ENST00000513957 F11RQ9Y624 299 aaKnown RBP6.31□□□□□ -1.4
NEDD4-210ENST00000513957 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.3□□□□□ -1.4
NEDD4-210ENST00000513957 A0A0B4J2A0 478 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 SEC14L6B5MCN3 397 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 CORTO00230 105 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 IGHV3-11P01762 117 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 OR13C7P0DN81 318 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 IL7P13232 177 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 AREGP15514 252 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 HOXD3P31249 432 aaPredicted RBP6.3□□□□□ -1.4
NEDD4-210ENST00000513957 ERHP84090 104 aaKnown RBP6.3□□□□□ -1.4
NEDD4-210ENST00000513957 WT1-ASQ06250 92 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 EXOSC2Q13868 293 aaKnown RBP6.3□□□□□ -1.4
NEDD4-210ENST00000513957 ACSM6Q6P461 480 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 PET117Q6UWS5 81 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 LGI3Q8N145 548 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 TMEM230Q96A57 120 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 DUX3Q96PT4 197 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 OR5B12Q96R08 314 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 ELOVL1Q9BW60 279 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 GAR1Q9NY12 217 aaKnown RBP6.3□□□□□ -1.4
NEDD4-210ENST00000513957 SIGLEC8Q9NYZ4 499 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 SHPKQ9UHJ6 478 aa6.3□□□□□ -1.4
NEDD4-210ENST00000513957 GGCTO75223 188 aaKnown RBP6.29□□□□□ -1.4
NEDD4-210ENST00000513957 OR2J3O76001 311 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 NDUFB6O95139 128 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 IGKV1-5P01602 117 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 SLC25A6P12236 298 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 FCGR2BP31994 310 aaPredicted RBP6.29□□□□□ -1.4
NEDD4-210ENST00000513957 SUB1P53999 127 aaKnown RBP eCLIP6.29□□□□□ -1.4
NEDD4-210ENST00000513957 TMEM187Q14656 261 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 RPEL1Q2QD12 228 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 SP6Q3SY56 376 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 TMEM268Q5VZI3 342 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 C1QL4Q86Z23 238 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 CENPSQ8N2Z9 138 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 SLC35G3Q8N808 338 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 LRTM2Q8N967 370 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 DCUN1D4Q92564 292 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 SDHCQ99643 169 aaPredicted RBP6.29□□□□□ -1.4
NEDD4-210ENST00000513957 ALX4Q9H161 411 aaPredicted RBP6.29□□□□□ -1.4
NEDD4-210ENST00000513957 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.29□□□□□ -1.4
NEDD4-210ENST00000513957 PEMTQ9UBM1 199 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 NSG2Q9Y328 171 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 NOTCH1P46531 2555 aa6.29□□□□□ -1.4
NEDD4-210ENST00000513957 A0A0B4J293 547 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 DBX1A6NMT0 343 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
NEDD4-210ENST00000513957 LGALS9O00182 355 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 ST8SIA3O43173 380 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 IFNA17P01571 189 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 PRH1P02810 166 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 REG1AP05451 166 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 MYOD1P15172 320 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 AKR1C4P17516 323 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 CCR6P51684 374 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 SLURP1P55000 103 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 ATP5IP56385 69 aaPredicted RBP6.28□□□□□ -1.4
NEDD4-210ENST00000513957 SPCS3P61009 180 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 SUPT4H1P63272 117 aaKnown RBP6.28□□□□□ -1.4
NEDD4-210ENST00000513957 KLF5Q13887 457 aaPredicted RBP6.28□□□□□ -1.4
NEDD4-210ENST00000513957 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 SPSB3Q6PJ21 355 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 TMED4Q7Z7H5 227 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 NOXA1Q86UR1 476 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 SELENOHQ8IZQ5 122 aaKnown RBP6.28□□□□□ -1.4
NEDD4-210ENST00000513957 OR10W1Q8NGF6 305 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 OR9G4Q8NGQ1 327 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 LHFPL5Q8TAF8 219 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 DLX4Q92988 240 aaPredicted RBP6.28□□□□□ -1.4
NEDD4-210ENST00000513957 BSCL2Q96G97 398 aaPredicted RBP6.28□□□□□ -1.4
NEDD4-210ENST00000513957 OR4C12Q96R67 309 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 TXN2Q99757 166 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 HINT2Q9BX68 163 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 TMED3Q9Y3Q3 217 aa6.28□□□□□ -1.4
NEDD4-210ENST00000513957 SORL1Q92673 2214 aa6.27□□□□□ -1.4
NEDD4-210ENST00000513957 A0A1B0GU03 582 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 A8MWP6 167 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 BMPR1BO00238 502 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 SAP30O75446 220 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 SCGB2A1O75556 95 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 NDUFB8O95169 186 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 SFT2D2O95562 160 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 SULT1A3P0DMM9 295 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 SULT1A4P0DMN0 295 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 SNCAP37840 140 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 HOXA1P49639 335 aaPredicted RBP6.27□□□□□ -1.41
NEDD4-210ENST00000513957 SMCO1Q147U7 214 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 ZNF674Q2M3X9 581 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 NMSQ5H8A3 153 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 PVRIGQ6DKI7 326 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 SLC25A24Q6NUK1 477 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 GPHB5Q86YW7 130 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 OR2K2Q8NGT1 345 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 ZNF502Q8TBZ5 544 aa6.27□□□□□ -1.41
NEDD4-210ENST00000513957 AURKAIP1Q9NWT8 199 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms