RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 HILPDAQ9Y5L2 63 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 C7orf71A4D174 169 aa6.46□□□□□ -1.37
CLCN3-209ENST00000513761 LHFPL4Q7Z7J7 247 aa6.46□□□□□ -1.37
CLCN3-209ENST00000513761 CDX2Q99626 313 aaPredicted RBP6.46□□□□□ -1.37
CLCN3-209ENST00000513761 CGB1A6NKQ9 187 aa6.46□□□□□ -1.37
CLCN3-209ENST00000513761 DUTP33316 252 aaKnown RBP6.46□□□□□ -1.37
CLCN3-209ENST00000513761 OR4C13Q8NGP0 309 aa6.46□□□□□ -1.37
CLCN3-209ENST00000513761 TMUB1Q9BVT8 246 aa6.46□□□□□ -1.37
CLCN3-209ENST00000513761 OSTCQ9NRP0 149 aa6.46□□□□□ -1.37
CLCN3-209ENST00000513761 SRSF7Q16629 238 aaKnown RBP eCLIP6.46□□□□□ -1.38
CLCN3-209ENST00000513761 OR9G1Q8NH87 305 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 MGST2Q99735 147 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 SLC25A33Q9BSK2 321 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 LOC102723996A0A087X1L8 192 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 TRAV5A0A0B4J249 113 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 PSMB2P49721 201 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 MBNL2Q5VZF2 373 aaKnown RBP6.46□□□□□ -1.38
CLCN3-209ENST00000513761 UNQ6494/PRO21346Q6UXR6 183 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 TMEM144Q7Z5S9 345 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 FAM216BQ8N7L0 139 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 DIRC2Q96SL1 478 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 MYO7BQ6PIF6 2116 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 SAA2-SAA4A0A096LPE2 208 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 TRAV3A0A0B4J244 114 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 A1L4Q6 167 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 PRR33A8MZF0 331 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 MGPP08493 103 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 NPSP0C0P6 89 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 SAA2P0DJI9 122 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-209ENST00000513761 IGHV1-2P23083 117 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 MORN2Q502X0 79 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 OR10J3Q5JRS4 329 aa6.46□□□□□ -1.38
CLCN3-209ENST00000513761 RPP21Q9H633 154 aaKnown RBP6.46□□□□□ -1.38
CLCN3-209ENST00000513761 FAM90A27PA6NNH2 459 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 FOXF2Q12947 444 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 SPANXN1Q5VSR9 72 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 TMEM136Q6ZRR5 245 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 Q6ZT83 130 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 C15orf61A6NNL5 157 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 ZNF585BQ52M93 769 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 WDR82Q6UXN9 313 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 C1orf174Q8IYL3 243 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 LYPD6BQ8NI32 183 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 ZNF71Q9NQZ8 489 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-209ENST00000513761 RNF115Q9Y4L5 304 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 LOC107984156A0A0G2JMH3 177 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 IQCF6A8MYZ5 107 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 MC5RP33032 325 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 ARL17AQ8IVW1 177 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 OR52E5Q8NH55 327 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
CLCN3-209ENST00000513761 FNDC4Q9H6D8 234 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-209ENST00000513761 S4R3C0 116 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 PI4KAP42356 2102 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 IGHV3-35A0A0C4DH35 117 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 J3QW42 95 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 CEACAM3P40198 252 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 C17orf82Q86X59 251 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-209ENST00000513761 LINC00473A8K010 186 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 ZNF502Q8TBZ5 544 aa6.45□□□□□ -1.38
CLCN3-209ENST00000513761 H3BUT2 72 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 IGKV1D-33P01593 117 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 IGKV1-33P01594 117 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 LINC00614P0C842 121 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 NTF4P34130 210 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 RIPPLY3P57055 190 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 ASCL4Q6XD76 172 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 ZNF414Q96IQ9 312 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 HIST1H4GQ99525 98 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 KLK15Q9H2R5 256 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 SAA1P0DJI8 122 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-209ENST00000513761 MYOD1P15172 320 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 C2orf83Q53S99 150 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 MRPL20Q9BYC9 149 aaKnown RBP6.44□□□□□ -1.38
CLCN3-209ENST00000513761 KBTBD11-OT1A0A1B0GTJ5 212 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 GPR183P32249 361 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 RSPO1Q2MKA7 263 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-209ENST00000513761 SMIM12Q96EX1 92 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 METRNQ9UJH8 293 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 CACNA1GO43497 2377 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 EP300Q09472 2414 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-209ENST00000513761 ZNF407Q9C0G0 2248 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 A0A1B0GUT8 65 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 C15orf62A8K5M9 175 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 ANOS1P23352 680 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 AMMECR1LQ6DCA0 310 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 OR10W1Q8NGF6 305 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 MAP1LC3AQ9H492 121 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 SPTBN1Q01082 2364 aaKnown RBP6.44□□□□□ -1.38
CLCN3-209ENST00000513761 C16orf97H3BN30 126 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 ECSCRQ19T08 205 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 ASCL5Q7RTU5 278 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 GPR82Q96P67 336 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 NAA38Q9BRA0 125 aaKnown RBP6.44□□□□□ -1.38
CLCN3-209ENST00000513761 GPX1P07203 203 aa6.44□□□□□ -1.38
CLCN3-209ENST00000513761 KIAA1671Q9BY89 1806 aa6.43□□□□□ -1.38
CLCN3-209ENST00000513761 TRAV8-6A0A0B4J262 113 aa6.43□□□□□ -1.38
CLCN3-209ENST00000513761 SPAARA0A1B0GVQ0 90 aa6.43□□□□□ -1.38
CLCN3-209ENST00000513761 PRB3Q04118 309 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms