RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 MGAM2Q2M2H8 2515 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 TRAV41A0A0B4J266 112 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 LOC100506127A0A0U1RQW1 187 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 IFITM5A6NNB3 132 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 TMEM14DPA8MWL7 114 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 J3QRK9 145 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 M0R1X1 148 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 FABP7O15540 132 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 MRPS14O60783 128 aaKnown RBP2.66□□□□□ -1.98
NUP54-212ENST00000513248 SC5DO75845 299 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 IGHG2P01859 326 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 SCTP09683 121 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 OR8U9P0C7N5 309 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 SAA2P0DJI9 122 aaPredicted RBP2.66□□□□□ -1.98
NUP54-212ENST00000513248 SLC6A1P30531 599 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 MYCNOSP40205 109 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 SERPINB10P48595 397 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 MFAP2P55001 183 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 OR10A3P58181 314 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 GNG2P59768 71 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 ARPC4P59998 168 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 GABARAPL2P60520 117 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 MXD1Q05195 221 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 UNC119Q13432 240 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 ARL6IP1Q15041 203 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 HMGN3Q15651 99 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 NEDD8Q15843 81 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 RTL8BQ17RB0 113 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 TIMM50Q3ZCQ8 353 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 RPL39P5Q59GN2 51 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 IDNKQ5T6J7 187 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 UNQ5815/PRO19632Q6UWF5 114 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 FAM131AQ6UXB0 335 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 TMEM91Q6ZNR0 172 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 PPP1R27Q86WC6 154 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 DRAXINQ8NBI3 349 aaPredicted RBP2.66□□□□□ -1.98
NUP54-212ENST00000513248 ZNF439Q8NDP4 499 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 OR4A4PQ8NGN8 299 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 OR10R2Q8NGX6 335 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 OR8U1Q8NH10 309 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 GRPEL2Q8TAA5 225 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 MAFIPQ8WZ33 124 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 FCGR1BQ92637 280 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 DLX4Q92988 240 aaPredicted RBP2.66□□□□□ -1.98
NUP54-212ENST00000513248 FLYWCH2Q96CP2 140 aaKnown RBP2.66□□□□□ -1.98
NUP54-212ENST00000513248 KCTD7Q96MP8 289 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 NABP2Q9BQ15 211 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 LPAR5Q9H1C0 372 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 OR2D2Q9H210 308 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 OR51J1Q9H342 316 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 FBXL15Q9H469 300 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 SLC35D1Q9NTN3 355 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 RDH8Q9NYR8 311 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 OR1A1Q9P1Q5 309 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 METTL1Q9UBP6 276 aaKnown RBP2.66□□□□□ -1.98
NUP54-212ENST00000513248 LSM2Q9Y333 95 aaKnown RBP2.66□□□□□ -1.98
NUP54-212ENST00000513248 RRP15Q9Y3B9 282 aaKnown RBP2.66□□□□□ -1.98
NUP54-212ENST00000513248 ANK2Q01484 3957 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 WNK1Q9H4A3 2382 aa2.66□□□□□ -1.98
NUP54-212ENST00000513248 TRAV1-2A0A0B4J238 106 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 IGHV3-35A0A0C4DH35 117 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 A0A0U1RRA0 63 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 TRDV1A0A1B0GX56 115 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 OR5H14A6NHG9 310 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 SEC14L6B5MCN3 397 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 G3V318 75 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 CREBL2O60519 120 aaPredicted RBP2.65□□□□□ -1.99
NUP54-212ENST00000513248 RBBP9O75884 186 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 SCGNO76038 276 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 DIRAS3O95661 229 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 CA2P00918 260 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 TRGV3P03979 118 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 OR8U8P0C7N1 319 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 GSTT2P0CG29 244 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 GSTT2BP0CG30 244 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 HIST1H1DP16402 221 aaKnown RBP2.65□□□□□ -1.99
NUP54-212ENST00000513248 CD36P16671 472 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 CNTFRP26992 372 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 LGALS7P47929 136 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 MEOX2P50222 304 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 ZNF137PP52743 207 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 TPPP2P59282 170 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 PITPNAQ00169 270 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 ZNF616Q08AN1 781 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 EBI3Q14213 229 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 SSX1Q16384 188 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 C5orf64Q2M2E5 130 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 DEFB136Q30KP8 78 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 VMA21Q3ZAQ7 101 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 CDNFQ49AH0 187 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 LY6G6FQ5SQ64 297 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 ZNF660Q6AZW8 331 aaPredicted RBP2.65□□□□□ -1.99
NUP54-212ENST00000513248 FAM71F2Q6NXP2 309 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 ZNF833PQ6ZTB9 187 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 TPRA1Q86W33 373 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 GAPTQ8N292 157 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 Q8N6K4 173 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.65□□□□□ -1.99
NUP54-212ENST00000513248 OR11H1Q8NG94 326 aa2.65□□□□□ -1.99
NUP54-212ENST00000513248 OR1N2Q8NGR9 330 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms