RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 FN1P02751 2386 aaKnown RBP2.78□□□□□ -1.96
HTT-210ENST00000512909 IGLV11-55A0A075B6I3 123 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 TRAV8-7A0A075B6U6 113 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 IGHV2-26A0A0B4J1V2 119 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 IGHV3-72A0A0B4J1Y9 119 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 KBTBD11-OT1A0A1B0GTJ5 212 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 TCRBV4S1A1TA0A5B7 111 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 TMEM30CPA0ZSE6 113 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 ZNF729A6NN14 1252 aaPredicted RBP2.78□□□□□ -1.96
HTT-210ENST00000512909 BUB1B-PAK6H3BSN5 160 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 AIPO00170 330 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 ZNF737O75373 536 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 EIF3GO75821 320 aaKnown RBP eCLIP2.78□□□□□ -1.96
HTT-210ENST00000512909 CLPXO76031 633 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 CDK1P06493 297 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 CD28P10747 220 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 IL3RAP26951 378 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 ERP29P30040 261 aaKnown RBP2.78□□□□□ -1.96
HTT-210ENST00000512909 MAP2K4P45985 399 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 REG1BP48304 166 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 RORCP51449 518 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 CCR6P51684 374 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 AQP4P55087 323 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 PLP1P60201 277 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 BLCAPP62952 87 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 MRPS15P82914 257 aaKnown RBP2.78□□□□□ -1.96
HTT-210ENST00000512909 DEFA6Q01524 100 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 EMX1Q04741 257 aaPredicted RBP2.78□□□□□ -1.96
HTT-210ENST00000512909 INSL4Q14641 139 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 CDK5R1Q15078 307 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 PSG5Q15238 335 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 ABCA11PQ4W5N1 156 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 HSD17B12Q53GQ0 312 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 DEFB121Q5J5C9 76 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 OGFRL1Q5TC84 451 aaPredicted RBP2.78□□□□□ -1.96
HTT-210ENST00000512909 MINOS1Q5TGZ0 78 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 GLT8D1Q68CQ7 371 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 OR10K2Q6IF99 312 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 Q6P435 159 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 Q6ZSR3 168 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 MS4A15Q8N5U1 240 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 DRAM1Q8N682 238 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 PXT1Q8NFP0 134 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 NPBQ8NG41 125 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 PLPPR1Q8TBJ4 325 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 MARCH1Q8TCQ1 289 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 CREB3L1Q96BA8 519 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 SMIM19Q96E16 107 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 P2RX4Q99571 388 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 FAAP24Q9BTP7 215 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 MND1Q9BWT6 205 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 CDCA4Q9BXL8 241 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 RHOFQ9HBH0 211 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 ZNF286AQ9HBT8 521 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 PLEKHJ1Q9NW61 149 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 XCL2Q9UBD3 114 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 LINC00527Q9UJ94 153 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 RAB26Q9ULW5 256 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 PSG11Q9UQ72 335 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 TBL2Q9Y4P3 447 aaKnown RBP2.78□□□□□ -1.96
HTT-210ENST00000512909 AMMECR1Q9Y4X0 333 aaPredicted RBP2.78□□□□□ -1.96
HTT-210ENST00000512909 MINOS1-NBL1R4GNA1 71 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 HSPE1-MOB4S4R3N1 261 aa2.78□□□□□ -1.96
HTT-210ENST00000512909 CSPG4Q6UVK1 2322 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 ABCA1O95477 2261 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 CSMD2Q7Z408 3487 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 NF1P21359 2839 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 NIPBLQ6KC79 2804 aaeCLIP2.77□□□□□ -1.97
HTT-210ENST00000512909 CSMD1Q96PZ7 3565 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 C2CD3Q4AC94 2353 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 IGLV4-69A0A075B6H9 119 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 A0A075B6Q4 140 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 SERPINE3A8MV23 424 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 J3QRK9 145 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 CCRL2O00421 344 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 MT-ND4P03905 459 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 SRMP19623 302 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 HTR2CP28335 458 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 BLVRBP30043 206 aaPredicted RBP2.77□□□□□ -1.97
HTT-210ENST00000512909 BTCP35070 178 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 SSTR5P35346 364 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 TALDO1P37837 337 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 CXCL5P42830 114 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 DLX6P56179 175 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 RBM11P57052 281 aaKnown RBP2.77□□□□□ -1.97
HTT-210ENST00000512909 RAB25P57735 213 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 MADCAM1Q13477 382 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 TPTE2P1Q5T6R2 138 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 FAM27D1Q5T7N8 215 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 SYT6Q5T7P8 510 aaPredicted RBP2.77□□□□□ -1.97
HTT-210ENST00000512909 HES5Q5TA89 166 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 ELP2Q6IA86 826 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 IZUMO2Q6UXV1 221 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 HEPN1Q6WQI6 88 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 Q6ZVH6 145 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 OR11H6Q8NGC7 330 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 CD300LFQ8TDQ1 290 aa2.77□□□□□ -1.97
HTT-210ENST00000512909 RGP1Q92546 391 aaPredicted RBP2.77□□□□□ -1.97
HTT-210ENST00000512909 MRPS24Q96EL2 167 aaKnown RBP2.77□□□□□ -1.97
HTT-210ENST00000512909 ZNF649Q9BS31 505 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms