RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 OR4E2Q8NGC2 313 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 OR4D11Q8NGI4 311 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 SFT2D1Q8WV19 159 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 EEF1AKMT1Q8WVE0 214 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 ULBP3Q9BZM4 244 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 DERL2Q9GZP9 239 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MS4A6AQ9H2W1 248 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 FKBP14Q9NWM8 211 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 RASL12Q9NYN1 266 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 IL36BQ9NZH7 164 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 RSL24D1Q9UHA3 163 aaKnown RBP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 AK3Q9UIJ7 227 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MYO7AQ13402 2215 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MTUS2Q5JR59 1369 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 ATRQ13535 2644 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 ZNF292O60281 2723 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 FLNCQ14315 2725 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 STRCQ7RTU9 1775 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 ABCA4P78363 2273 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MAP1BP46821 2468 aaKnown RBP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 PKD1L2Q7Z442 2459 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MYO18BQ8IUG5 2567 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 EPG5Q9HCE0 2579 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 PKD1P98161 4303 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 ANKRD11Q6UB99 2663 aaPredicted RBP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 TGP01266 2768 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 CHD3Q12873 2000 aaKnown RBP-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 UNC13CQ8NB66 2214 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 PKHD1P08F94 4074 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 MAST2Q6P0Q8 1798 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 COL4A5P29400 1685 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 COL1A1P02452 1464 aaPredicted RBP-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 NUP153P49790 1475 aaKnown RBP-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 DNAH3Q8TD57 4116 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 IGHV1-69-2A0A0G2JMI3 117 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 PQLC2LA1A4F0 135 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 ZNF736B4DX44 427 aaPredicted RBP-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 GOLGA6L19H0YKK7 550 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SMLR1H3BR10 107 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 KCNK1O00180 336 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 ACOX3O15254 700 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 CCL25O15444 150 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SULT1B1O43704 296 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 UBL3O95164 117 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 APOA1P02647 267 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 C1QAP02745 245 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 PRM2P04554 102 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 REG1AP05451 166 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SRP19P09132 144 aaKnown RBP-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 PET100P0DJ07 73 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 FGF6P10767 208 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 KCNE1P15382 129 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 CD151P48509 253 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 RHOGP84095 191 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SLAMF1Q13291 335 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 PPP1R1AQ13522 171 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 KHDC3LQ587J8 217 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 FBXO48Q5FWF7 155 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 FAM74A1Q5RGS3 127 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 IBA57Q5T440 356 aaKnown RBP-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 C6orf52Q5T4I8 152 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 FAM78BQ5VT40 261 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SYPL2Q5VXT5 272 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SLC51BQ86UW2 128 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 CRLF3Q8IUI8 442 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 CLVS1Q8IUQ0 354 aaPredicted RBP-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 BOD1L2Q8IYS8 172 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 EXOC3-AS1Q8N2X6 119 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 OR5A1Q8NGJ0 315 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 MCFD2Q8NI22 146 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 DNAJC9Q8WXX5 260 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SCGB3A1Q96QR1 104 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 TSPAN32Q96QS1 320 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 PRRT1Q99946 306 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SIKE1Q9BRV8 207 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 HDHD2Q9H0R4 259 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 FAM96AQ9H5X1 160 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 EFCAB1Q9HAE3 211 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SPACA1Q9HBV2 294 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 C1orf109Q9NX04 203 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 EURLQ9NYK6 297 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 TMEM14CQ9P0S9 112 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 DKKL1Q9UK85 242 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 PLECQ15149 4684 aaKnown RBP-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SACSQ9NZJ4 4579 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 MUC17Q685J3 4493 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 SETXQ7Z333 2677 aaKnown RBP-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 CACNA1HO95180 2353 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 RIMS2Q9UQ26 1411 aa-0.13□□□□□ -2.43
PDGFC-208ENST00000512711 MAP1AP78559 2803 aaPredicted RBP-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 AKAP13Q12802 2813 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 WDR87Q6ZQQ6 2873 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 SPTBP11277 2137 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 KIF15Q9NS87 1388 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 NF1P21359 2839 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 MXRA5Q9NR99 2828 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 TRBV20OR9-2A0A075B6H5 130 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 TRAV3A0A0B4J244 114 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 LINC00854A0A1B0GVQ3 168 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 SMIM9A6NGZ8 99 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms