RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 RNF167Q9H6Y7 350 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 TCHHQ07283 1943 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 IGHG3P01860 377 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 SLC25A34Q6PIV7 304 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 TSSC4Q9Y5U2 329 aaPredicted RBP7.45□□□□□ -1.22
VCAN-208ENST00000512590 CNTRLQ7Z7A1 2325 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 TRBV7-1A0A0A6YYK4 115 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 A0A0J9YY99 117 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM223BA6NKX1 122 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM223AQ8IWN6 122 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 OR52E5Q8NH55 327 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FOXS1O43638 330 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 PGLYRP1O75594 196 aaPredicted RBP7.45□□□□□ -1.22
VCAN-208ENST00000512590 ASPHD2Q6ICH7 369 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 TMEM52Q8NDY8 209 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 GATAD1Q8WUU5 269 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 RBM38Q9H0Z9 239 aaKnown RBP7.45□□□□□ -1.22
VCAN-208ENST00000512590 LRRC37A3O60309 1634 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 NALCNQ8IZF0 1738 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A10PA6NDY2 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A18PA6NE21 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A16PA6NEW6 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A20PA6NIJ5 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A8PA6NJQ4 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A7PA6NKC0 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A22PA8MWA6 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A12PA8MX19 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A5PA8MXJ8 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A23PA8MXZ1 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 IGLL5B9A064 214 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 C1QBP02746 253 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A15PP0C7V4 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A13PP0C7W8 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A14PP0C7W9 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A24PP0C7X0 464 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 SAXO1Q8IYX7 474 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 KIR2DL5BQ8NHK3 375 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 RNF125Q96EQ8 232 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 NDUFAF3Q9BU61 184 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 Q9H3A6 140 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 RPP21Q9H633 154 aaKnown RBP7.45□□□□□ -1.22
VCAN-208ENST00000512590 UBE2D4Q9Y2X8 147 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 CHTOPQ9Y3Y2 248 aaKnown RBP7.45□□□□□ -1.22
VCAN-208ENST00000512590 AZU1P20160 251 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 SLAQ13239 276 aa7.45□□□□□ -1.22
VCAN-208ENST00000512590 ZCCHC24Q8N2G6 241 aaKnown RBP7.45□□□□□ -1.22
VCAN-208ENST00000512590 SDHCQ99643 169 aaPredicted RBP7.45□□□□□ -1.22
VCAN-208ENST00000512590 ETDCA0A1B0GVM5 59 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 IL18BPO95998 194 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 PMCHL1Q16048 86 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 C15orf32Q32M92 178 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 ANKRD39Q53RE8 183 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 LINC00518Q8N0U6 118 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 FAM208AQ9UK61 1670 aaKnown RBP7.44□□□□□ -1.22
VCAN-208ENST00000512590 SRRM4A7MD48 611 aaKnown RBP7.44□□□□□ -1.22
VCAN-208ENST00000512590 VCYO14598 125 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 LTN1O94822 1766 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 UMODP07911 640 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 RFPL3SP0C7P2 107 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 RUSC1-AS1Q66K80 236 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 GTSF1Q8WW33 167 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 CACNG8Q8WXS5 425 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 WDYHV1Q96HA8 205 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 PMVKQ15126 192 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 MTURNQ8N3F0 131 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 PIFOQ8TCI5 191 aa7.44□□□□□ -1.22
VCAN-208ENST00000512590 NDUFB8O95169 186 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 ZNF79Q15937 498 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 ZNF479Q96JC4 524 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 PPIFP30405 207 aaKnown RBP7.43□□□□□ -1.22
VCAN-208ENST00000512590 Q6ZWC4 215 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 ORMDL3Q8N138 153 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 RAMP1O60894 148 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 NDPQ00604 133 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A1Q86YD7 464 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 OTORQ9NRC9 128 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 ZNF98A6NK75 572 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 SLC17A3O00476 420 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 LINC00614P0C842 121 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 CDKN1BP46527 198 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 CACNA1GO43497 2377 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 FGF9P31371 208 aaPredicted RBP7.43□□□□□ -1.22
VCAN-208ENST00000512590 GAGE6Q13070 117 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 Q6AWC8 147 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 MAVSQ7Z434 540 aa7.43□□□□□ -1.22
VCAN-208ENST00000512590 NAV1Q8NEY1 1877 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 A0A1B0GW15 77 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 FSHBP01225 129 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 TCF15Q12870 199 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 ZNF474Q6S9Z5 364 aaPredicted RBP7.42□□□□□ -1.22
VCAN-208ENST00000512590 DEFB104AQ8WTQ1 72 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 GPR146Q96CH1 333 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 DTX4Q9Y2E6 619 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 LSM4Q9Y4Z0 139 aaKnown RBP7.42□□□□□ -1.22
VCAN-208ENST00000512590 A0A1B0GUT8 65 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 PLPP2O43688 288 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 BCL2P10415 239 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 PRIMA1Q86XR5 153 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 H1FOOQ8IZA3 346 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms