RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 DENND4CQ5VZ89 1909 aa4.75□□□□□ -1.65
TRAPPC11-209ENST00000512476 DOCK7Q96N67 2140 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 SHROOM3Q8TF72 1996 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 IGHV2-26A0A0B4J1V2 119 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 TRAV39A0A0B4J263 110 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 A0A0D9SEW6 157 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 C1QAP02745 245 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 GABRA3P34903 492 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 PPP1CAP62136 330 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 MEIG1Q5JSS6 88 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 TRPT1Q86TN4 253 aaKnown RBP4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 GGNQ86UU5 652 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 OR52R1Q8NGF1 315 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 OR4C16Q8NGL9 310 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 ZNF721Q8TF20 911 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 ZNF501Q96CX3 271 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 SELENOIQ9C0D9 397 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 Q9H521 79 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 NUP205Q92621 2012 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 C1orf196B1AJZ1 125 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 TBL1XO60907 577 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 GRB2P62993 217 aaKnown RBP4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 CRADDP78560 199 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 GUCA2BQ16661 112 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 FAM74A1Q5RGS3 127 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 ZNF664Q8N3J9 261 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 FRZBQ92765 325 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 SLC25A21Q9BQT8 299 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 DERL1Q9BUN8 251 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 IFI27L2Q9H2X8 130 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 SPANXCQ9NY87 97 aa4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 NUP210Q8TEM1 1887 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-209ENST00000512476 HELZP42694 1942 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 POLEQ07864 2286 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 NDUFC2-KCTD14E9PQ53 114 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 H0YJW9 148 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 AIPO00170 330 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 UPK1AO00322 258 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 LST1O00453 97 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 FSTL3O95633 263 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 BCL2P10415 239 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 CST6Q15828 149 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 C11orf71Q6IPW1 123 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 ZNF584Q8IVC4 421 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 RNF175Q8N4F7 328 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 C3orf22Q8N5N4 141 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 TBL1YQ9BQ87 522 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 FBXL12Q9NXK8 326 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 CCL26Q9Y258 94 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 PYGO1Q9Y3Y4 419 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 IGLV2-8P01709 118 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 HLA-DQB1P01920 261 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 OPRK1P41145 380 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 PROK1P58294 105 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 GTF2H5Q6ZYL4 71 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 MOB1BQ7L9L4 216 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 FER1L6-AS1Q8NA97 138 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 OR4K5Q8NGD3 323 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 WFDC5Q8TCV5 224 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 MOB1AQ9H8S9 216 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 CBLN4Q9NTU7 201 aa4.73□□□□□ -1.65
TRAPPC11-209ENST00000512476 SMIM31A0A1B0GVY4 71 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 IFITM5A6NNB3 132 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 CTSDP07339 412 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 UCHL1P09936 223 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 CECR9P0C854 216 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 HLA-EP13747 358 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 CRISP2P16562 243 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 SPRP35270 261 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 PSMB2P49721 201 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 RPS11P62280 158 aaKnown RBP eCLIP4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 SPANXN3Q5MJ09 141 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 TEX29Q8N6K0 151 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 HIST1H4GQ99525 98 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 TM2D3Q9BRN9 247 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 AICDAQ9GZX7 198 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 COX11Q9Y6N1 276 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 TRAV5A0A0B4J249 113 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 A0A0J9YW62 118 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 LOC285095A0A1B0GVY8 99 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 C7orf71A4D174 169 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 COX7A2P2O60397 106 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 IL3RAP26951 378 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 NDUFA6P56556 154 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 GNGT1P63211 74 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 RTL8BQ17RB0 113 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 TMEM241Q24JQ0 296 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 RUSC1-AS1Q66K80 236 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 Q6Q795 121 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 SGMS2Q8NHU3 365 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 OR4C12Q96R67 309 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 RTL8AQ9BWD3 113 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 GGTLC1Q9BX51 225 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 ZNF702PQ9H963 129 aa4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 SOX21Q9Y651 276 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 MYO18AQ92614 2054 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-209ENST00000512476 TRAV41A0A0B4J266 112 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 B4DEV8 164 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 GPX1P07203 203 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms