RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	RRAS2	P62070	204 aa	Predicted RBP	11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	ERH	P84090	104 aa	Known RBP	11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	C15orf32	Q32M92	178 aa		11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	HAPLN4	Q86UW8	402 aa		11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	NDUFA11	Q86Y39	141 aa		11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	KLHL30-AS1	Q8NEE0	82 aa		11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	OR1P1	Q8NH06	330 aa		11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	RAX2	Q96IS3	184 aa		11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	MED28	Q9H204	178 aa		11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	LSM5	Q9Y4Y9	91 aa	Known RBP	11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	TRRAP	Q9Y4A5	3859 aa		11.23	□□□□□ -0.61
MATR3-238	ENST00000512107	TRAV14DV4	A0A0A6YYC5	116 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	PMS2P5	A8MQ11	134 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107		G3V3Q6	166 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	VWF	P04275	2813 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	DEFA4	P12838	97 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	ARL16	Q0P5N6	197 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	C2orf83	Q53S99	150 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	TMEM65	Q6PI78	240 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	SHISA2	Q6UWI4	295 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	SLC24A4	Q8NFF2	622 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	MISP3	Q96FF7	219 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	BSCL2	Q96G97	398 aa	Predicted RBP	11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	UBE2E2	Q96LR5	201 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	RNF126	Q9BV68	326 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	SLA2	Q9H6Q3	261 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	OR5AC2	Q9NZP5	309 aa		11.22	□□□□□ -0.61
MATR3-238	ENST00000512107	IGHV4OR15-8	A0A075B7B6	117 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107		A0A087WW49	117 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	PIGBOS1	A0A0B4J2F0	54 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	ANKRD34B	A5PLL1	514 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	PRSS46	E5RG02	174 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	MT-CO2	P00403	227 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	EXOSC2	Q13868	293 aa	Known RBP	11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	ZNF343	Q6P1L6	599 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	NECAP1	Q8NC96	275 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	ZNF502	Q8TBZ5	544 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	SCARB1	Q8WTV0	552 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	SMIM8	Q96KF7	97 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	NMES1	Q9C002	83 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	ENY2	Q9NPA8	101 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	ZC4H2	Q9NQZ6	224 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	ZFP57	Q9NU63	452 aa		11.21	□□□□□ -0.61
MATR3-238	ENST00000512107	hCG_2014768	A0A024R1R8	64 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	FAM24A	A6NFZ4	105 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	PPP5D1	E7EU14	171 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	LGALS1	P09382	135 aa	Known RBP	11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	NPY1R	P25929	384 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	S100A10	P60903	97 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	ATP5G2	Q06055	141 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	LRRC37A5P	Q49AS3	106 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	SPANXN5	Q5MJ07	72 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	C4orf3	Q8WVX3	66 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	PINX1	Q96BK5	328 aa	Known RBP	11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	PSENEN	Q9NZ42	101 aa		11.2	□□□□□ -0.62
MATR3-238	ENST00000512107	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	IGSF23	A1L1A6	192 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	FAM223B	A6NKX1	122 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	SMLR1	H3BR10	107 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	BMPR1B	O00238	502 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	MED6	O75586	246 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	IFNA10	P01566	189 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	HIST1H1B	P16401	226 aa	Known RBP	11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	SNCA	P37840	140 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	HTR2B	P41595	481 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	SLURP1	P55000	103 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	RUNX1	Q01196	453 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	TMEM14EP	Q6UXP3	125 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	FAM223A	Q8IWN6	122 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	PPP1R1C	Q8WVI7	109 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	USMG5	Q96IX5	58 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	HIPK2	Q9H2X6	1198 aa		11.19	□□□□□ -0.62
MATR3-238	ENST00000512107	NUDT19	A8MXV4	375 aa		11.18	□□□□□ -0.62
MATR3-238	ENST00000512107	DEDD	O75618	318 aa		11.18	□□□□□ -0.62
MATR3-238	ENST00000512107	CLEC19A	Q6UXS0	136 aa		11.18	□□□□□ -0.62
MATR3-238	ENST00000512107	CHRDL1	Q9BU40	450 aa		11.18	□□□□□ -0.62
MATR3-238	ENST00000512107		U3KQ87	197 aa		11.18	□□□□□ -0.62
MATR3-238	ENST00000512107	MPC2	O95563	127 aa		11.17	□□□□□ -0.62
MATR3-238	ENST00000512107	METTL15P1	P0C7V9	234 aa		11.17	□□□□□ -0.62
MATR3-238	ENST00000512107	EDN2	P20800	178 aa		11.17	□□□□□ -0.62
MATR3-238	ENST00000512107	ADM	P35318	185 aa		11.17	□□□□□ -0.62
MATR3-238	ENST00000512107	FHL3	Q13643	280 aa		11.17	□□□□□ -0.62
MATR3-238	ENST00000512107	OR11H1	Q8NG94	326 aa		11.17	□□□□□ -0.62
MATR3-238	ENST00000512107	OR1N2	Q8NGR9	330 aa		11.17	□□□□□ -0.62
MATR3-238	ENST00000512107	VN1R17P	Q8TDU5	208 aa		11.17	□□□□□ -0.62
MATR3-238	ENST00000512107	RAB40C	Q96S21	281 aa		11.17	□□□□□ -0.62
MATR3-238	ENST00000512107	PAIP2B	Q9ULR5	123 aa	Known RBP	11.17	□□□□□ -0.62
MATR3-238	ENST00000512107		A0A0G2JLM5	398 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	OR2T8	A6NH00	312 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	CCL24	O00175	119 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	WIPF1	O43516	503 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	CLEC3B	P05452	202 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	GPR183	P32249	361 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	CD69	Q07108	199 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	CD300C	Q08708	224 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	PRSS54	Q6PEW0	395 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	MRPL41	Q8IXM3	137 aa	Known RBP	11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms