RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 NBEAL2Q6ZNJ1 2754 aa12.42□□□□□ -0.42
DDX41-213ENST00000512027 KMT2CQ8NEZ4 4911 aaKnown RBP12.41□□□□□ -0.42
DDX41-213ENST00000512027 ZNF207O43670 478 aaKnown RBP12.41□□□□□ -0.42
DDX41-213ENST00000512027 SCAF4O95104 1147 aaKnown RBP12.41□□□□□ -0.42
DDX41-213ENST00000512027 CDS2O95674 445 aa12.41□□□□□ -0.42
DDX41-213ENST00000512027 MT-CO2P00403 227 aa12.41□□□□□ -0.42
DDX41-213ENST00000512027 KLF9Q13886 244 aaPredicted RBP12.41□□□□□ -0.42
DDX41-213ENST00000512027 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
DDX41-213ENST00000512027 SELENOHQ8IZQ5 122 aaKnown RBP12.41□□□□□ -0.42
DDX41-213ENST00000512027 OR1L6Q8NGR2 347 aa12.41□□□□□ -0.42
DDX41-213ENST00000512027 TMEM190Q8WZ59 177 aa12.41□□□□□ -0.42
DDX41-213ENST00000512027 RCHY1Q96PM5 261 aa12.41□□□□□ -0.42
DDX41-213ENST00000512027 NEURL2Q9BR09 285 aa12.41□□□□□ -0.42
DDX41-213ENST00000512027 TECRQ9NZ01 308 aaKnown RBP12.41□□□□□ -0.42
DDX41-213ENST00000512027 ATG12O94817 140 aa12.4□□□□□ -0.42
DDX41-213ENST00000512027 NXPH3O95157 252 aa12.4□□□□□ -0.42
DDX41-213ENST00000512027 HOXA1P49639 335 aaPredicted RBP12.4□□□□□ -0.42
DDX41-213ENST00000512027 ERHP84090 104 aaKnown RBP12.4□□□□□ -0.42
DDX41-213ENST00000512027 ZNF57Q68EA5 555 aaPredicted RBP12.4□□□□□ -0.42
DDX41-213ENST00000512027 CCDC190Q86UF4 302 aa12.4□□□□□ -0.42
DDX41-213ENST00000512027 DEFB125Q8N687 156 aa12.4□□□□□ -0.42
DDX41-213ENST00000512027 RBPMSQ93062 196 aaKnown RBP12.4□□□□□ -0.42
DDX41-213ENST00000512027 GPR146Q96CH1 333 aa12.4□□□□□ -0.42
DDX41-213ENST00000512027 PDCD10Q9BUL8 212 aa12.4□□□□□ -0.42
DDX41-213ENST00000512027 C20orf24Q9BUV8 137 aa12.4□□□□□ -0.42
DDX41-213ENST00000512027 SCP2D1Q9UJQ7 156 aa12.4□□□□□ -0.42
DDX41-213ENST00000512027 UFC1Q9Y3C8 167 aa12.4□□□□□ -0.42
DDX41-213ENST00000512027 A8MZ25 164 aa12.39□□□□□ -0.43
DDX41-213ENST00000512027 B3GALNT1O75752 331 aa12.39□□□□□ -0.43
DDX41-213ENST00000512027 CTSGP08311 255 aa12.39□□□□□ -0.43
DDX41-213ENST00000512027 RNASE2P10153 161 aaKnown RBP12.39□□□□□ -0.43
DDX41-213ENST00000512027 AKR1C4P17516 323 aa12.39□□□□□ -0.43
DDX41-213ENST00000512027 S100A5P33763 92 aa12.39□□□□□ -0.43
DDX41-213ENST00000512027 TMEM187Q14656 261 aa12.39□□□□□ -0.43
DDX41-213ENST00000512027 SPSB3Q6PJ21 355 aa12.39□□□□□ -0.43
DDX41-213ENST00000512027 PALMDQ9NP74 551 aa12.39□□□□□ -0.43
DDX41-213ENST00000512027 CACNG5Q9UF02 275 aa12.39□□□□□ -0.43
DDX41-213ENST00000512027 NDUFA4O00483 81 aa12.38□□□□□ -0.43
DDX41-213ENST00000512027 C8orf88P0DMB2 117 aa12.38□□□□□ -0.43
DDX41-213ENST00000512027 SNCAP37840 140 aa12.38□□□□□ -0.43
DDX41-213ENST00000512027 MFAP4P55083 255 aa12.38□□□□□ -0.43
DDX41-213ENST00000512027 SUPT4H1P63272 117 aaKnown RBP12.38□□□□□ -0.43
DDX41-213ENST00000512027 DHODHQ02127 395 aa12.38□□□□□ -0.43
DDX41-213ENST00000512027 TOMM5Q8N4H5 51 aa12.38□□□□□ -0.43
DDX41-213ENST00000512027 TUBA4BQ9H853 241 aa12.38□□□□□ -0.43
DDX41-213ENST00000512027 ELLP55199 621 aaPredicted RBP12.37□□□□□ -0.43
DDX41-213ENST00000512027 HAGHQ16775 308 aa12.37□□□□□ -0.43
DDX41-213ENST00000512027 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
DDX41-213ENST00000512027 TM2D3Q9BRN9 247 aa12.37□□□□□ -0.43
DDX41-213ENST00000512027 RETNQ9HD89 108 aa12.37□□□□□ -0.43
DDX41-213ENST00000512027 MRPL36Q9P0J6 103 aaKnown RBP12.37□□□□□ -0.43
DDX41-213ENST00000512027 MRPL27Q9P0M9 148 aaKnown RBP12.37□□□□□ -0.43
DDX41-213ENST00000512027 TMEM56-RWDD3S4R434 201 aa12.37□□□□□ -0.43
DDX41-213ENST00000512027 IGHV3-49A0A0A0MS15 119 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 OR11H12B2RN74 326 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 INS-IGF2F8WCM5 200 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 ZNF701M0R085 212 aaPredicted RBP12.36□□□□□ -0.43
DDX41-213ENST00000512027 MLANAQ16655 118 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 MARC2Q969Z3 335 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 GALNT14Q96FL9 552 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 ATP6V0BQ99437 205 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 ZMAT4Q9H898 229 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 SRD5A3Q9H8P0 318 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 ENY2Q9NPA8 101 aa12.36□□□□□ -0.43
DDX41-213ENST00000512027 DAZ1Q9NQZ3 744 aaKnown RBP12.36□□□□□ -0.43
DDX41-213ENST00000512027 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.36□□□□□ -0.43
DDX41-213ENST00000512027 NUPL2O15504 423 aaKnown RBP12.35□□□□□ -0.43
DDX41-213ENST00000512027 GNG7O60262 68 aa12.35□□□□□ -0.43
DDX41-213ENST00000512027 YIF1AO95070 293 aa12.35□□□□□ -0.43
DDX41-213ENST00000512027 FAUP35544 74 aaKnown RBP12.35□□□□□ -0.43
DDX41-213ENST00000512027 SPCS3P61009 180 aa12.35□□□□□ -0.43
DDX41-213ENST00000512027 AARDQ4LEZ3 155 aa12.35□□□□□ -0.43
DDX41-213ENST00000512027 LYZL2Q7Z4W2 148 aa12.35□□□□□ -0.43
DDX41-213ENST00000512027 OR52B4Q8NGK2 314 aa12.35□□□□□ -0.43
DDX41-213ENST00000512027 SRRQ9GZT4 340 aa12.35□□□□□ -0.43
DDX41-213ENST00000512027 FNDC4Q9H6D8 234 aaPredicted RBP12.35□□□□□ -0.43
DDX41-213ENST00000512027 IGHV3OR16-13A0A075B7E8 117 aa12.34□□□□□ -0.43
DDX41-213ENST00000512027 IGHV3-74A0A0B4J1X5 117 aa12.34□□□□□ -0.43
DDX41-213ENST00000512027 RBMY1BA6NDE4 496 aaKnown RBP12.34□□□□□ -0.43
DDX41-213ENST00000512027 RBMY1EA6NEQ0 496 aaKnown RBP12.34□□□□□ -0.43
DDX41-213ENST00000512027 RBMY1DP0C7P1 496 aaKnown RBP12.34□□□□□ -0.43
DDX41-213ENST00000512027 FCGR2BP31994 310 aaPredicted RBP12.34□□□□□ -0.43
DDX41-213ENST00000512027 AP3S2P59780 193 aa12.34□□□□□ -0.43
DDX41-213ENST00000512027 BSXQ3C1V8 233 aa12.34□□□□□ -0.43
DDX41-213ENST00000512027 PVRIGQ6DKI7 326 aa12.34□□□□□ -0.43
DDX41-213ENST00000512027 LINC00322Q6ZN03 302 aaPredicted RBP12.34□□□□□ -0.43
DDX41-213ENST00000512027 RBPMS2Q6ZRY4 209 aaKnown RBP12.34□□□□□ -0.43
DDX41-213ENST00000512027 SCGB3A2Q96PL1 93 aa12.34□□□□□ -0.43
DDX41-213ENST00000512027 TXN2Q99757 166 aa12.34□□□□□ -0.43
DDX41-213ENST00000512027 KCNIP3Q9Y2W7 256 aa12.34□□□□□ -0.43
DDX41-213ENST00000512027 CEBPZOSA8MTT3 80 aa12.33□□□□□ -0.44
DDX41-213ENST00000512027 OPRK1P41145 380 aa12.33□□□□□ -0.44
DDX41-213ENST00000512027 RELQ04864 619 aaPredicted RBP12.33□□□□□ -0.44
DDX41-213ENST00000512027 BAK1Q16611 211 aa12.33□□□□□ -0.44
DDX41-213ENST00000512027 SPANXN2Q5MJ10 180 aa12.33□□□□□ -0.44
DDX41-213ENST00000512027 SLC16A13Q7RTY0 426 aa12.33□□□□□ -0.44
DDX41-213ENST00000512027 DUSP18Q8NEJ0 188 aa12.33□□□□□ -0.44
DDX41-213ENST00000512027 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
DDX41-213ENST00000512027 IL22RA2Q969J5 263 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms