RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 RCL1Q9Y2P8 373 aaKnown RBP15.21■□□□□ 0.03
SMAD1-211ENST00000512019 CORTO00230 105 aa15.2■□□□□ 0.02
SMAD1-211ENST00000512019 IFNA10P01566 189 aa15.2■□□□□ 0.02
SMAD1-211ENST00000512019 CXCL3P19876 107 aa15.2■□□□□ 0.02
SMAD1-211ENST00000512019 NPY1RP25929 384 aa15.2■□□□□ 0.02
SMAD1-211ENST00000512019 ATP5IP56385 69 aaPredicted RBP15.2■□□□□ 0.02
SMAD1-211ENST00000512019 IL15RAQ13261 267 aa15.2■□□□□ 0.02
SMAD1-211ENST00000512019 UBE2E2Q96LR5 201 aa15.2■□□□□ 0.02
SMAD1-211ENST00000512019 FBXL7Q9UJT9 491 aa15.2■□□□□ 0.02
SMAD1-211ENST00000512019 LSM5Q9Y4Y9 91 aaKnown RBP15.2■□□□□ 0.02
SMAD1-211ENST00000512019 K7EPK0 472 aa15.19■□□□□ 0.02
SMAD1-211ENST00000512019 OR2J3O76001 311 aa15.19■□□□□ 0.02
SMAD1-211ENST00000512019 PVALBP20472 110 aaPredicted RBP15.19■□□□□ 0.02
SMAD1-211ENST00000512019 RPL23AP62750 156 aaKnown RBP15.19■□□□□ 0.02
SMAD1-211ENST00000512019 RAB32Q13637 225 aa15.19■□□□□ 0.02
SMAD1-211ENST00000512019 BEAN1Q3B7T3 259 aa15.19■□□□□ 0.02
SMAD1-211ENST00000512019 C2orf83Q53S99 150 aa15.19■□□□□ 0.02
SMAD1-211ENST00000512019 NDUFA11Q86Y39 141 aa15.19■□□□□ 0.02
SMAD1-211ENST00000512019 ZNF491Q8N8L2 437 aa15.19■□□□□ 0.02
SMAD1-211ENST00000512019 L7N2F9 121 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 PET100P0DJ07 73 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 MFAP2P55001 183 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 TAS2R30P59541 319 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 VAMP2P63027 116 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 ATP5G2Q06055 141 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 C15orf32Q32M92 178 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 C11orf87Q6NUJ2 197 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 MISP3Q96FF7 219 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 SMIM8Q96KF7 97 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 ZNF436Q9C0F3 470 aaPredicted RBP15.18■□□□□ 0.02
SMAD1-211ENST00000512019 DMRT1Q9Y5R6 373 aa15.18■□□□□ 0.02
SMAD1-211ENST00000512019 NUDT19A8MXV4 375 aa15.17■□□□□ 0.02
SMAD1-211ENST00000512019 PRB2P02812 416 aaPredicted RBP15.17■□□□□ 0.02
SMAD1-211ENST00000512019 RLN2P04090 185 aa15.17■□□□□ 0.02
SMAD1-211ENST00000512019 GIPP09681 153 aaPredicted RBP15.17■□□□□ 0.02
SMAD1-211ENST00000512019 CDX1P47902 265 aaPredicted RBP15.17■□□□□ 0.02
SMAD1-211ENST00000512019 RAB11AP62491 216 aa15.17■□□□□ 0.02
SMAD1-211ENST00000512019 DEFA5Q01523 94 aa15.17■□□□□ 0.02
SMAD1-211ENST00000512019 EXOSC2Q13868 293 aaKnown RBP15.17■□□□□ 0.02
SMAD1-211ENST00000512019 LRRC37A5PQ49AS3 106 aa15.17■□□□□ 0.02
SMAD1-211ENST00000512019 PVRIGQ6DKI7 326 aa15.17■□□□□ 0.02
SMAD1-211ENST00000512019 RNASEH2CQ8TDP1 164 aaKnown RBP15.17■□□□□ 0.02
SMAD1-211ENST00000512019 PPP1R1CQ8WVI7 109 aa15.17■□□□□ 0.02
SMAD1-211ENST00000512019 CXorf58Q96LI9 332 aa15.17■□□□□ 0.02
SMAD1-211ENST00000512019 PSENENQ9NZ42 101 aa15.17■□□□□ 0.02
SMAD1-211ENST00000512019 STRAPQ9Y3F4 350 aaKnown RBP15.17■□□□□ 0.02
SMAD1-211ENST00000512019 TSC22D2O75157 780 aa15.16■□□□□ 0.02
SMAD1-211ENST00000512019 OR8U8P0C7N1 319 aa15.16■□□□□ 0.02
SMAD1-211ENST00000512019 KIAA0141Q14154 515 aaPredicted RBP15.16■□□□□ 0.02
SMAD1-211ENST00000512019 SPANXN5Q5MJ07 72 aa15.16■□□□□ 0.02
SMAD1-211ENST00000512019 KLHL30-AS1Q8NEE0 82 aa15.16■□□□□ 0.02
SMAD1-211ENST00000512019 C4orf3Q8WVX3 66 aa15.16■□□□□ 0.02
SMAD1-211ENST00000512019 A0A1W2PRX2 142 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 H3BP45 60 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 DEDDO75618 318 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 NDUFB8O95169 186 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 IFNA4P05014 189 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 LGALS1P09382 135 aaKnown RBP15.15■□□□□ 0.02
SMAD1-211ENST00000512019 RAP2BP61225 183 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 NSUN5P1Q3KNT7 163 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 FAM209BQ5JX69 171 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 SAMD5Q5TGI4 173 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 VN1R17PQ8TDU5 208 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 EEF1AKMT3Q96AZ1 226 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 PINX1Q96BK5 328 aaKnown RBP15.15■□□□□ 0.02
SMAD1-211ENST00000512019 OR4C12Q96R67 309 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 GNB4Q9HAV0 340 aa15.15■□□□□ 0.02
SMAD1-211ENST00000512019 PAIP2BQ9ULR5 123 aaKnown RBP15.15■□□□□ 0.02
SMAD1-211ENST00000512019 RPS10-NUDT3A0A1W2PQS6 291 aa15.14■□□□□ 0.01
SMAD1-211ENST00000512019 C15orf62A8K5M9 175 aa15.14■□□□□ 0.01
SMAD1-211ENST00000512019 TMEM50AO95807 157 aa15.14■□□□□ 0.01
SMAD1-211ENST00000512019 MT-CO2P00403 227 aa15.14■□□□□ 0.01
SMAD1-211ENST00000512019 IGHV3-11P01762 117 aa15.14■□□□□ 0.01
SMAD1-211ENST00000512019 OPRK1P41145 380 aa15.14■□□□□ 0.01
SMAD1-211ENST00000512019 PAX9P55771 341 aa15.14■□□□□ 0.01
SMAD1-211ENST00000512019 TMEM170AQ8WVE7 144 aa15.14■□□□□ 0.01
SMAD1-211ENST00000512019 DNAH3Q8TD57 4116 aa15.14■□□□□ 0.01
SMAD1-211ENST00000512019 TRBV7-1A0A0A6YYK4 115 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 MFSD2BA6NFX1 497 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 E5RGE8 158 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 I3L2K1 104 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 K7EIM0 57 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 MPC2O95563 127 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 BCAP31P51572 246 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 CAV2P51636 162 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 RUNX1Q01196 453 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 FGL1Q08830 312 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 ZNF343Q6P1L6 599 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 WDR89Q96FK6 387 aaPredicted RBP15.13■□□□□ 0.01
SMAD1-211ENST00000512019 OR5B12Q96R08 314 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 C11orf1Q9H5F2 150 aa15.13■□□□□ 0.01
SMAD1-211ENST00000512019 hCG_2014768A0A024R1R8 64 aa15.12■□□□□ 0.01
SMAD1-211ENST00000512019 ADARB2-AS1A8MUL3 147 aa15.12■□□□□ 0.01
SMAD1-211ENST00000512019 SCAF4O95104 1147 aaKnown RBP15.12■□□□□ 0.01
SMAD1-211ENST00000512019 KPRPQ5T749 579 aaPredicted RBP15.12■□□□□ 0.01
SMAD1-211ENST00000512019 ETFRF1Q6IPR1 90 aa15.12■□□□□ 0.01
SMAD1-211ENST00000512019 ETV3LQ6ZN32 361 aa15.12■□□□□ 0.01
SMAD1-211ENST00000512019 SCARB1Q8WTV0 552 aa15.12■□□□□ 0.01
SMAD1-211ENST00000512019 LYRM2Q9NU23 88 aaPredicted RBP15.12■□□□□ 0.01
SMAD1-211ENST00000512019 C21orf62Q9NYP8 219 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms