RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ANKRD20A5PA0PJZ0 165 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 MFSD2BA6NFX1 497 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 C16orf90A8MZG2 172 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 K7EMT4 169 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 RAB3DO95716 219 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 CTSDP07339 412 aaPredicted RBP8.39□□□□□ -1.07
RNF4-216ENST00000511859 AKAIN1P0CW23 69 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 INPP1P49441 399 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 TAS2R19P59542 299 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 ZNF124Q15973 351 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 TRIQKQ629K1 86 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 Q6ZR54 194 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 TMEM17Q86X19 198 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 TOMM5Q8N4H5 51 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 GDPD1Q8N9F7 314 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 OR4C16Q8NGL9 310 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 ZNF502Q8TBZ5 544 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 SECTM1Q8WVN6 248 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 OR2A7Q96R45 310 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 ZNF2Q9BSG1 426 aaPredicted RBP8.39□□□□□ -1.07
RNF4-216ENST00000511859 OR2W1Q9Y3N9 320 aa8.39□□□□□ -1.07
RNF4-216ENST00000511859 APOBP04114 4563 aaKnown RBP8.39□□□□□ -1.07
RNF4-216ENST00000511859 TGOLN2O43493 480 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 KBTBD11O94819 623 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 PPYP01298 95 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 IFNA10P01566 189 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 IFNA21P01568 189 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 IFNA17P01571 189 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 RBMY1A1P0DJD3 496 aaKnown RBP8.38□□□□□ -1.07
RNF4-216ENST00000511859 RBMY1CP0DJD4 496 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 IL7P13232 177 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 MIFP14174 115 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 AREGP15514 252 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 RPA2P15927 270 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 HERV-K104P61576 105 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 SSBP1Q04837 148 aaKnown RBP8.38□□□□□ -1.07
RNF4-216ENST00000511859 ZNF846Q147U1 533 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 RBMY1FQ15415 496 aaKnown RBP8.38□□□□□ -1.07
RNF4-216ENST00000511859 SCGB2B2Q4G0G5 96 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 TMEM167AQ8TBQ9 72 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 GPHA2Q96T91 129 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 MCUBQ9NWR8 336 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 PRELID3BQ9Y3B1 194 aa8.38□□□□□ -1.07
RNF4-216ENST00000511859 DEFB131BA0A096LNP1 70 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 A0A1B0GW64 132 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 NDUFA4O00483 81 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 FCGR3BO75015 233 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 CD74P04233 296 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 PPP5CP53041 499 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 KLF9Q13886 244 aaPredicted RBP8.37□□□□□ -1.07
RNF4-216ENST00000511859 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 SPSB3Q6PJ21 355 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 LINC00299Q6ZSB3 139 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 SSX9Q7RTT3 188 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 OR6F1Q8NGZ6 308 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 WDR12Q9GZL7 423 aaKnown RBP8.37□□□□□ -1.07
RNF4-216ENST00000511859 SLC5A7Q9GZV3 580 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 FXYD6Q9H0Q3 95 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 CCL28Q9NRJ3 127 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 TAS2R8Q9NYW2 309 aa8.37□□□□□ -1.07
RNF4-216ENST00000511859 IGHV4-28A0A0C4DH34 117 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 DISC1C4P0D8 188 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 TBPP20226 339 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 TMEM41BQ5BJD5 291 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 DHRS11Q6UWP2 260 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 VKORC1L1Q8N0U8 176 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 PUSL1Q8N0Z8 303 aaKnown RBP8.36□□□□□ -1.07
RNF4-216ENST00000511859 OR51S1Q8NGJ8 323 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 VN1R17PQ8TDU5 208 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 GIMAP1Q8WWP7 306 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 BSCL2Q96G97 398 aaPredicted RBP8.36□□□□□ -1.07
RNF4-216ENST00000511859 ATP6V0BQ99437 205 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 TSC22D3Q99576 134 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 C20orf24Q9BUV8 137 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 HRASLSQ9HDD0 168 aa8.36□□□□□ -1.07
RNF4-216ENST00000511859 C15orf62A8K5M9 175 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 CYB5BO43169 146 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 TNFSF12O43508 249 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 REG1AP05451 166 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 PGAM2P15259 253 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 PI3P19957 117 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 AP3S2P59780 193 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 RPL8P62917 257 aaKnown RBP8.35□□□□□ -1.07
RNF4-216ENST00000511859 PAFAH1B2P68402 229 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 MEF2DQ14814 521 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 ZNF818PQ6ZRF7 136 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 Q6ZRM9 215 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 MARCH1Q8TCQ1 289 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 MOB3AQ96BX8 217 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 RNF2Q99496 336 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 CHRDL1Q9BU40 450 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 SMPXQ9UHP9 88 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 IGLV2-18A0A075B6J9 118 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
RNF4-216ENST00000511859 OR2T8A6NH00 312 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 ZNF705EA8MWA4 302 aaPredicted RBP8.35□□□□□ -1.07
RNF4-216ENST00000511859 CHEK1O14757 476 aa8.35□□□□□ -1.07
RNF4-216ENST00000511859 DFFBO76075 338 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms