RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SELENOHQ8IZQ5 122 aaKnown RBP9.99□□□□□ -0.81
RNF4-215ENST00000511843 DEFB125Q8N687 156 aa9.99□□□□□ -0.81
RNF4-215ENST00000511843 RRNAD1Q96FB5 475 aaKnown RBP9.99□□□□□ -0.81
RNF4-215ENST00000511843 PRRT1Q99946 306 aa9.99□□□□□ -0.81
RNF4-215ENST00000511843 RABL2AQ9UBK7 228 aaPredicted RBP9.99□□□□□ -0.81
RNF4-215ENST00000511843 RABL2BQ9UNT1 228 aa9.99□□□□□ -0.81
RNF4-215ENST00000511843 A8MZ25 164 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 ATG12O94817 140 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 NXPH3O95157 252 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 CDS2O95674 445 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 CTSGP08311 255 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 HOXA1P49639 335 aaPredicted RBP9.98□□□□□ -0.81
RNF4-215ENST00000511843 ERHP84090 104 aaKnown RBP9.98□□□□□ -0.81
RNF4-215ENST00000511843 SURF2Q15527 256 aaPredicted RBP9.98□□□□□ -0.81
RNF4-215ENST00000511843 ZNF79Q15937 498 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 HAGHQ16775 308 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 ZNF114Q8NC26 417 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 OR1L6Q8NGR2 347 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 TRIM63Q969Q1 353 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 TM2D3Q9BRN9 247 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 RETNQ9HD89 108 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 PALMDQ9NP74 551 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 SLC2A8Q9NY64 477 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 UFC1Q9Y3C8 167 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 STAB2Q8WWQ8 2551 aa9.98□□□□□ -0.81
RNF4-215ENST00000511843 IGHV3-49A0A0A0MS15 119 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 C8orf88P0DMB2 117 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 AKR1C4P17516 323 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 SNCAP37840 140 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 MFAP4P55083 255 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 KLF9Q13886 244 aaPredicted RBP9.97□□□□□ -0.81
RNF4-215ENST00000511843 SPSB3Q6PJ21 355 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 RBPMSQ93062 196 aaKnown RBP9.97□□□□□ -0.81
RNF4-215ENST00000511843 GPR146Q96CH1 333 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 PDCD10Q9BUL8 212 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 ZMAT4Q9H898 229 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 CACNG5Q9UF02 275 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 SCP2D1Q9UJQ7 156 aa9.97□□□□□ -0.81
RNF4-215ENST00000511843 RBMY1BA6NDE4 496 aaKnown RBP9.96□□□□□ -0.82
RNF4-215ENST00000511843 RBMY1EA6NEQ0 496 aaKnown RBP9.96□□□□□ -0.82
RNF4-215ENST00000511843 OR11H12B2RN74 326 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 NDUFA4O00483 81 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 B3GALNT1O75752 331 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 RBMY1DP0C7P1 496 aaKnown RBP9.96□□□□□ -0.82
RNF4-215ENST00000511843 RNASE2P10153 161 aaKnown RBP9.96□□□□□ -0.82
RNF4-215ENST00000511843 ELLP55199 621 aaPredicted RBP9.96□□□□□ -0.82
RNF4-215ENST00000511843 DHODHQ02127 395 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 TMEM187Q14656 261 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 MLANAQ16655 118 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 OR52B4Q8NGK2 314 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 MARC2Q969Z3 335 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 SRD5A3Q9H8P0 318 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 DAZ1Q9NQZ3 744 aaKnown RBP9.96□□□□□ -0.82
RNF4-215ENST00000511843 MRPL36Q9P0J6 103 aaKnown RBP9.96□□□□□ -0.82
RNF4-215ENST00000511843 MRPL27Q9P0M9 148 aaKnown RBP9.96□□□□□ -0.82
RNF4-215ENST00000511843 NBEAL2Q6ZNJ1 2754 aa9.96□□□□□ -0.82
RNF4-215ENST00000511843 NUPL2O15504 423 aaKnown RBP9.95□□□□□ -0.82
RNF4-215ENST00000511843 GNG7O60262 68 aa9.95□□□□□ -0.82
RNF4-215ENST00000511843 YIF1AO95070 293 aa9.95□□□□□ -0.82
RNF4-215ENST00000511843 S100A5P33763 92 aa9.95□□□□□ -0.82
RNF4-215ENST00000511843 SUPT4H1P63272 117 aaKnown RBP9.95□□□□□ -0.82
RNF4-215ENST00000511843 CCDC190Q86UF4 302 aa9.95□□□□□ -0.82
RNF4-215ENST00000511843 TOMM5Q8N4H5 51 aa9.95□□□□□ -0.82
RNF4-215ENST00000511843 ENY2Q9NPA8 101 aa9.95□□□□□ -0.82
RNF4-215ENST00000511843 KMT2CQ8NEZ4 4911 aaKnown RBP9.94□□□□□ -0.82
RNF4-215ENST00000511843 IGHV3OR16-13A0A075B7E8 117 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 IGHV3-74A0A0B4J1X5 117 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 INS-IGF2F8WCM5 200 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 LINC00322Q6ZN03 302 aaPredicted RBP9.94□□□□□ -0.82
RNF4-215ENST00000511843 RBPMS2Q6ZRY4 209 aaKnown RBP9.94□□□□□ -0.82
RNF4-215ENST00000511843 SLC16A13Q7RTY0 426 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 TMED4Q7Z7H5 227 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 FAM219AQ8IW50 185 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 ATP6V0BQ99437 205 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 FAM110AQ9BQ89 295 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 FNDC4Q9H6D8 234 aaPredicted RBP9.94□□□□□ -0.82
RNF4-215ENST00000511843 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.94□□□□□ -0.82
RNF4-215ENST00000511843 UBQLN2Q9UHD9 624 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 TMEM56-RWDD3S4R434 201 aa9.94□□□□□ -0.82
RNF4-215ENST00000511843 CEBPZOSA8MTT3 80 aa9.93□□□□□ -0.82
RNF4-215ENST00000511843 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
RNF4-215ENST00000511843 OPRK1P41145 380 aa9.93□□□□□ -0.82
RNF4-215ENST00000511843 SPCS3P61009 180 aa9.93□□□□□ -0.82
RNF4-215ENST00000511843 RELQ04864 619 aaPredicted RBP9.93□□□□□ -0.82
RNF4-215ENST00000511843 AARDQ4LEZ3 155 aa9.93□□□□□ -0.82
RNF4-215ENST00000511843 LYZL2Q7Z4W2 148 aa9.93□□□□□ -0.82
RNF4-215ENST00000511843 GALNT14Q96FL9 552 aa9.93□□□□□ -0.82
RNF4-215ENST00000511843 CITED4Q96RK1 184 aa9.93□□□□□ -0.82
RNF4-215ENST00000511843 TXN2Q99757 166 aa9.93□□□□□ -0.82
RNF4-215ENST00000511843 SPATA25Q9BR10 227 aa9.93□□□□□ -0.82
RNF4-215ENST00000511843 GAR1Q9NY12 217 aaKnown RBP9.93□□□□□ -0.82
RNF4-215ENST00000511843 IGKV3-7A0A075B6H7 116 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 TRAV25A0A0B4J276 109 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 IGHV7-4-1A0A0J9YVY3 117 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 C15orf62A8K5M9 175 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 K7EMT4 169 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 ZNF701M0R085 212 aaPredicted RBP9.92□□□□□ -0.82
RNF4-215ENST00000511843 FAUP35544 74 aaKnown RBP9.92□□□□□ -0.82
RNF4-215ENST00000511843 SUB1P53999 127 aaKnown RBP eCLIP9.92□□□□□ -0.82
RNF4-215ENST00000511843 BSXQ3C1V8 233 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms