RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 C19orf24Q9BVV8 132 aa11.3□□□□□ -0.6
RBM47-207ENST00000510871 MRPL20Q9BYC9 149 aaKnown RBP11.3□□□□□ -0.6
RBM47-207ENST00000510871 OCIAD2Q56VL3 154 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 MBNL2Q5VZF2 373 aaKnown RBP11.29□□□□□ -0.6
RBM47-207ENST00000510871 ZCCHC24Q8N2G6 241 aaKnown RBP11.29□□□□□ -0.6
RBM47-207ENST00000510871 TBL2Q9Y4P3 447 aaKnown RBP11.29□□□□□ -0.6
RBM47-207ENST00000510871 LOC105371242A0A075B767 164 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 CD55P08174 381 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 PEAR1Q5VY43 1037 aaPredicted RBP11.29□□□□□ -0.6
RBM47-207ENST00000510871 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 COL4A3Q01955 1670 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 RRHO14718 337 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 IGFBP2P18065 325 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 FAM106CPP0CH98 169 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 CCL3L1P16619 93 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 RIGQ13278 110 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 GBGT1Q8N5D6 347 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 C5orf17Q8NAS9 161 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 IFI27L2Q9H2X8 130 aa11.29□□□□□ -0.6
RBM47-207ENST00000510871 TNFSF13O75888 250 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 AMY1AP04745 511 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 LYL1P12980 280 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 SRRM5B3KS81 715 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 DUTP33316 252 aaKnown RBP11.28□□□□□ -0.6
RBM47-207ENST00000510871 DMRTC2Q8IXT2 367 aaPredicted RBP11.28□□□□□ -0.6
RBM47-207ENST00000510871 GATAD1Q8WUU5 269 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 IMMP2LQ96T52 175 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 H3BVH4 76 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 IGHG3P01860 377 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 Q6P435 159 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 OR51G1Q8NGK1 321 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 SNHG12Q9BXW3 62 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 SERF1AO75920 110 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 CA1P00915 261 aaPredicted RBP11.28□□□□□ -0.6
RBM47-207ENST00000510871 TIMP3P35625 211 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 Q1RN00 199 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 DNM1P46Q6ZS02 220 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 COLCA1Q6ZS62 124 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 OR4A5Q8NH83 315 aa11.28□□□□□ -0.6
RBM47-207ENST00000510871 COL25A1Q9BXS0 654 aaPredicted RBP11.28□□□□□ -0.6
RBM47-207ENST00000510871 MRPL32Q9BYC8 188 aaKnown RBP11.28□□□□□ -0.6
RBM47-207ENST00000510871 ACACAQ13085 2346 aa11.27□□□□□ -0.6
RBM47-207ENST00000510871 IGHV1-46P01743 117 aa11.27□□□□□ -0.6
RBM47-207ENST00000510871 SMIM17P0DL12 118 aa11.27□□□□□ -0.6
RBM47-207ENST00000510871 ZNF137PP52743 207 aa11.27□□□□□ -0.6
RBM47-207ENST00000510871 SLC25A15Q9Y619 301 aa11.27□□□□□ -0.6
RBM47-207ENST00000510871 TRBV6-6A0A0A6YYG2 114 aa11.27□□□□□ -0.61
RBM47-207ENST00000510871 ORM1P02763 201 aa11.27□□□□□ -0.61
RBM47-207ENST00000510871 FXYD3Q14802 87 aa11.27□□□□□ -0.61
RBM47-207ENST00000510871 HS3ST6Q96QI5 342 aa11.27□□□□□ -0.61
RBM47-207ENST00000510871 RSPO1Q2MKA7 263 aaPredicted RBP11.27□□□□□ -0.61
RBM47-207ENST00000510871 Q8NFD4 153 aa11.27□□□□□ -0.61
RBM47-207ENST00000510871 ZNF407Q9C0G0 2248 aa11.27□□□□□ -0.61
RBM47-207ENST00000510871 SNCGO76070 127 aa11.27□□□□□ -0.61
RBM47-207ENST00000510871 Q6ZS49 121 aa11.27□□□□□ -0.61
RBM47-207ENST00000510871 JKAMPQ9P055 326 aa11.27□□□□□ -0.61
RBM47-207ENST00000510871 TMSB15BA0A087X1C1 80 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 MOSP00540 346 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 OR9G9P0C7N8 305 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 NEU1Q99519 415 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 RBFOX2O43251 390 aaKnown RBP eCLIP11.26□□□□□ -0.61
RBM47-207ENST00000510871 NUDT3O95989 172 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 NTF4P34130 210 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 TEX29Q8N6K0 151 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 SNRNP40Q96DI7 357 aaKnown RBP11.26□□□□□ -0.61
RBM47-207ENST00000510871 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 A8MWL6 223 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 CD177Q8N6Q3 437 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 ANAPC10Q9UM13 185 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 H3BTX0 84 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 CGAP01215 116 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 SAA1P0DJI8 122 aaPredicted RBP11.26□□□□□ -0.61
RBM47-207ENST00000510871 CST9LQ9H4G1 147 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
RBM47-207ENST00000510871 C15orf61A6NNL5 157 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 OR2J3O76001 311 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 ATP5G3P48201 142 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 C20orf204Q6ZNR8 217 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 SPACA3Q8IXA5 215 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 CITED2Q99967 270 aaPredicted RBP11.25□□□□□ -0.61
RBM47-207ENST00000510871 IL36BQ9NZH7 164 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 UPK2O00526 184 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 FCGR2BP31994 310 aaPredicted RBP11.25□□□□□ -0.61
RBM47-207ENST00000510871 MFAP4P55083 255 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 RPL30P62888 115 aaKnown RBP11.25□□□□□ -0.61
RBM47-207ENST00000510871 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 PF4V1P10720 104 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 ESDP10768 282 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 ADMP35318 185 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
RBM47-207ENST00000510871 FBXL15Q9H469 300 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
RBM47-207ENST00000510871 MLNRO43193 412 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 RAB9AP51151 201 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 CENPWQ5EE01 88 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms