RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 CA2P00918 260 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 AREGP15514 252 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 IL3RAP26951 378 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 CHRNA7P36544 502 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 PRR20EP86478 221 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 PRR20CP86479 221 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 PRR20DP86480 221 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 PRR20BP86481 221 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 PRR20AP86496 221 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 PRCDQ00LT1 54 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 RTL8BQ17RB0 113 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 FAM78BQ5VT40 261 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 HIST2H2BCQ6DN03 193 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 LEAP2Q969E1 77 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 CCL13Q99616 98 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 FKBP11Q9NYL4 201 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 RPUSD1Q9UJJ7 312 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 CRYBG3Q68DQ2 2970 aa13.03□□□□□ -0.32
SQSTM1-213ENST00000510187 UPK2O00526 184 aa13.02□□□□□ -0.32
SQSTM1-213ENST00000510187 UHRF2Q96PU4 802 aa13.02□□□□□ -0.32
SQSTM1-213ENST00000510187 DERL1Q9BUN8 251 aa13.02□□□□□ -0.32
SQSTM1-213ENST00000510187 PLEKHA3Q9HB20 300 aa13.02□□□□□ -0.32
SQSTM1-213ENST00000510187 FUT9Q9Y231 359 aa13.02□□□□□ -0.32
SQSTM1-213ENST00000510187 hADV38S2A0JD32 116 aa13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 NKX6-3A6NJ46 265 aa13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 C9JCJ5 164 aa13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 RPL15P61313 204 aaKnown RBP13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 UTF1Q5T230 341 aa13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 SSMEM1Q8WWF3 244 aa13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 TIMD4Q96H15 378 aa13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 SLC35E1Q96K37 410 aa13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 ZMAT5Q9UDW3 170 aaKnown RBP13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 LINC00312Q9Y6C7 94 aa13.02□□□□□ -0.33
SQSTM1-213ENST00000510187 GCN1Q92616 2671 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 TRBV23-1A0A0A0MS06 115 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 SCO2A0A1W2PP80 73 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 TSTD3H0UI37 97 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 GCGP01275 180 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 IGHV4-39P01824 125 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 DEFA6Q01524 100 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 MEF2CQ06413 473 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 GAMTQ14353 236 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 SSX2Q16385 188 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 C9orf152Q5JTZ5 239 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 DUX4L9Q6RFH8 374 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 PNKDQ8N490 385 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 FAM216BQ8N7L0 139 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 OR5T1Q8NG75 326 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 C19orf24Q9BVV8 132 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 SLC35D1Q9NTN3 355 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 BET1LQ9NYM9 111 aa13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 YTHDF2Q9Y5A9 579 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-213ENST00000510187 DSCAML1Q8TD84 2053 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 TET2Q6N021 2002 aaPredicted RBP13□□□□□ -0.33
SQSTM1-213ENST00000510187 TRBV20OR9-2A0A075B6H5 130 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 J3QR06 171 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 FSTL3O95633 263 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 CNN1P51911 297 aaKnown RBP13□□□□□ -0.33
SQSTM1-213ENST00000510187 KRTAP10-9P60411 292 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 C2orf83Q53S99 150 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 ZNF114Q8NC26 417 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 OR5B3Q8NH48 314 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 TMEM18Q96B42 140 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 GAL3ST2Q9H3Q3 398 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 TMEM167BQ9NRX6 74 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 SLC45A2Q9UMX9 530 aa13□□□□□ -0.33
SQSTM1-213ENST00000510187 A0A0U1RQK1 487 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 ZNF320A2RRD8 509 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 LINC00869P0C866 280 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 CT45A6P0DMU7 189 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 CT45A5P0DMU8 189 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 CT45A7P0DMV0 189 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 PAX1P15863 534 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 TEX38Q6PEX7 206 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 LYPD2Q6UXB3 125 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 ZNF833PQ6ZTB9 187 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 OR10G8Q8NGN5 311 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 OR1L8Q8NGR8 309 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 TMEM37Q8WXS4 190 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 SEPSECSQ9HD40 501 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 SPG11Q96JI7 2443 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 FASNP49327 2511 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 GNG10P50151 68 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 ATP5J2P56134 94 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 CLEC12BQ2HXU8 276 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 SGMS2Q8NHU3 365 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 OSR1Q8TAX0 266 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 TRAPPC1Q9Y5R8 145 aa12.99□□□□□ -0.33
SQSTM1-213ENST00000510187 INS-IGF2F8WCM5 200 aa12.98□□□□□ -0.33
SQSTM1-213ENST00000510187 RD3LP0DJH9 198 aa12.98□□□□□ -0.33
SQSTM1-213ENST00000510187 GZMBP10144 247 aa12.98□□□□□ -0.33
SQSTM1-213ENST00000510187 GPR6P46095 362 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-213ENST00000510187 YPEL3P61236 119 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-213ENST00000510187 SPATA31B1PQ5VZV4 182 aa12.98□□□□□ -0.33
SQSTM1-213ENST00000510187 FBN2P35556 2912 aa12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 APOA2P02652 100 aa12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 RPL31P62899 125 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 FAM71F2Q6NXP2 309 aa12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 OR4P4Q8NGL7 312 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms