RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 MRM2Q9UI43 246 aaKnown RBP3.02□□□□□ -1.93
USP53-205ENST00000509769 MSRB2Q9Y3D2 182 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 OTOFQ9HC10 1997 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 MYH8P13535 1937 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 IGLV3-10A0A075B6K4 115 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 TRAV26-1A0A087WT03 109 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 FABP5P3A8MUU1 101 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 C5orf67F2Z3F1 127 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 F2RL2O00254 374 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 DXOO77932 396 aaKnown RBP3.02□□□□□ -1.93
USP53-205ENST00000509769 VSIG8P0DPA2 414 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 PTGER1P34995 402 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 TFPI2P48307 235 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 H2BFSP57053 126 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 NXPH1P58417 271 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 FGF12P61328 243 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 P2RY6Q15077 328 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 CCL14Q16627 93 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 ETDBQ3ZM63 59 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 BVES-AS1Q5T3Y7 98 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 PVRIGQ6DKI7 326 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 C9orf47Q6ZRZ4 202 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 IL17RELQ6ZVW7 336 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 ZNF683Q8IZ20 524 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 CEND1Q8N111 149 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 SP7Q8TDD2 431 aaPredicted RBP3.02□□□□□ -1.93
USP53-205ENST00000509769 C8orf44Q96CB5 159 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 PRORYQ9H606 182 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 PRO1854Q9UHT4 67 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 TRAV41A0A0B4J266 112 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 H0YGG7 62 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 NDUFB1O75438 58 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 CRYGCP07315 174 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 CCL8P80075 99 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 PRSS53Q2L4Q9 553 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 ZNF793Q6ZN11 406 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 OR13A1Q8NGR1 328 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 CNRIP1Q96F85 164 aaPredicted RBP3.02□□□□□ -1.93
USP53-205ENST00000509769 FOXB1Q99853 325 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 TMUB1Q9BVT8 246 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 TM2D1Q9BX74 207 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 TRGV11A0A075B6L2 103 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 TRBV23OR9-2A0A075B6M9 112 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 TRBV5-3A0A0A0MS03 114 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 GRPP07492 148 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 NPPBP16860 134 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 RPL27AP46776 148 aaKnown RBP3.02□□□□□ -1.93
USP53-205ENST00000509769 RPL34P49207 117 aaKnown RBP3.02□□□□□ -1.93
USP53-205ENST00000509769 ZNF826PQ6ZT77 177 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 C8orf31Q8N9H6 132 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 BAALCQ8WXS3 180 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 MBNL3Q9NUK0 354 aaKnown RBP3.02□□□□□ -1.93
USP53-205ENST00000509769 TMEM74BQ9NUR3 256 aa3.02□□□□□ -1.93
USP53-205ENST00000509769 KMT2EQ8IZD2 1858 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 A0A0A6YYD5 115 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 NCR2O95944 276 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 PLA2G2AP14555 144 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 HMGA1P17096 107 aaKnown RBP3.01□□□□□ -1.93
USP53-205ENST00000509769 PSMB8P28062 276 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 CSRP3P50461 194 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 PDLIM4P50479 330 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 SSPNQ14714 243 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 ECSCRQ19T08 205 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 FAM231DQ6ZW35 169 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 ZAR1Q86SH2 424 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 FAM90A1Q86YD7 464 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 NPWQ8N729 165 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 CARD19Q96LW7 228 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 IL17FQ96PD4 163 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 PLAC1Q9HBJ0 212 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 CCL28Q9NRJ3 127 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 MRPS18CQ9Y3D5 142 aaKnown RBP3.01□□□□□ -1.93
USP53-205ENST00000509769 WNT6Q9Y6F9 365 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 DNAJC25-GNG10A0A024R161 153 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 TRAV3A0A0B4J244 114 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 A0A1W2PQU0 124 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 PRR32B1ATL7 298 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 C2CD4DB7Z1M9 353 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 DUSP14O95147 198 aaKnown RBP3.01□□□□□ -1.93
USP53-205ENST00000509769 IGFBP2P18065 325 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 DOCK1Q14185 1865 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 FAM159AQ6UWV7 190 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 LYG1Q8N1E2 194 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 SMRP1Q8NCR6 262 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 ST6GALNAC3Q8NDV1 305 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 SCAMP5Q8TAC9 235 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 OSR1Q8TAX0 266 aaPredicted RBP3.01□□□□□ -1.93
USP53-205ENST00000509769 DDB2Q92466 427 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 PLXNA1Q9UIW2 1896 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 IGKV6-21A0A0C4DH24 114 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 TCRBV5S1A1TA0A578 114 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 C15orf62A8K5M9 175 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 HIGD1CA8MV81 97 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 VCYO14598 125 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 PGLYRP1O75594 196 aaPredicted RBP3.01□□□□□ -1.93
USP53-205ENST00000509769 IGHV3-7P01780 117 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 PRSS41Q7RTY9 318 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 PIANPQ8IYJ0 282 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 STPG4Q8N801 248 aa3.01□□□□□ -1.93
USP53-205ENST00000509769 C11orf44Q8N8P7 122 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms