RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 WIPF1O43516 503 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 NDUFB8O95169 186 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 IGHV3-11P01762 117 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 PF4P02776 101 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 RNASE2P10153 161 aaKnown RBP12.68□□□□□ -0.38
SKP2-205ENST00000509692 IAPPP10997 89 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 HTR2BP41595 481 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 POLR2GP62487 172 aaKnown RBP eCLIP12.68□□□□□ -0.38
SKP2-205ENST00000509692 ATP5G2Q06055 141 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 OXLD1Q5BKU9 147 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 OR5B12Q96R08 314 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
SKP2-205ENST00000509692 C15orf32Q32M92 178 aa12.67□□□□□ -0.38
SKP2-205ENST00000509692 BSXQ3C1V8 233 aa12.67□□□□□ -0.38
SKP2-205ENST00000509692 SLC24A4Q8NFF2 622 aa12.67□□□□□ -0.38
SKP2-205ENST00000509692 C4orf3Q8WVX3 66 aa12.67□□□□□ -0.38
SKP2-205ENST00000509692 MED28Q9H204 178 aa12.67□□□□□ -0.38
SKP2-205ENST00000509692 MBPP02686 304 aaPredicted RBP12.66□□□□□ -0.38
SKP2-205ENST00000509692 BEAN1Q3B7T3 259 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 MISP3Q96FF7 219 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 CIB3Q96Q77 187 aaPredicted RBP12.66□□□□□ -0.38
SKP2-205ENST00000509692 U3KQ87 197 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 TGP01266 2768 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 I3L521 148 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 SSSCA1O60232 199 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 IFNA10P01566 189 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 LGALS1P09382 135 aaKnown RBP12.66□□□□□ -0.38
SKP2-205ENST00000509692 CD33P20138 364 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 NPY1RP25929 384 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 H2BFSP57053 126 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 IL15RAQ13261 267 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 EXOSC2Q13868 293 aaKnown RBP12.66□□□□□ -0.38
SKP2-205ENST00000509692 C2orf83Q53S99 150 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 PVRIGQ6DKI7 326 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 LINC00482Q8N8I6 264 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 DUX3Q96PT4 197 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 NMES1Q9C002 83 aa12.66□□□□□ -0.38
SKP2-205ENST00000509692 LY86O95711 162 aa12.65□□□□□ -0.38
SKP2-205ENST00000509692 IGLL1P15814 213 aa12.65□□□□□ -0.38
SKP2-205ENST00000509692 RUNX1Q01196 453 aa12.65□□□□□ -0.38
SKP2-205ENST00000509692 DEFB136Q30KP8 78 aa12.65□□□□□ -0.38
SKP2-205ENST00000509692 KPRPQ5T749 579 aaPredicted RBP12.65□□□□□ -0.38
SKP2-205ENST00000509692 NOXA1Q86UR1 476 aa12.65□□□□□ -0.38
SKP2-205ENST00000509692 CXorf58Q96LI9 332 aa12.65□□□□□ -0.38
SKP2-205ENST00000509692 RCL1Q9Y2P8 373 aaKnown RBP12.65□□□□□ -0.38
SKP2-205ENST00000509692 LSM5Q9Y4Y9 91 aaKnown RBP12.65□□□□□ -0.38
SKP2-205ENST00000509692 S4R3C0 116 aa12.65□□□□□ -0.38
SKP2-205ENST00000509692 IGHV3-21A0A0B4J1V1 117 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 MFSD2BA6NFX1 497 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 K7EPK0 472 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 CORTO00230 105 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 IGHV3-23P01764 117 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 CYCSP99999 105 aaKnown RBP12.64□□□□□ -0.39
SKP2-205ENST00000509692 FCN2Q15485 313 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 ZNF343Q6P1L6 599 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 VN1R17PQ8TDU5 208 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 TMEM170AQ8WVE7 144 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 EEF1AKMT3Q96AZ1 226 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 PINX1Q96BK5 328 aaKnown RBP12.64□□□□□ -0.39
SKP2-205ENST00000509692 RAX2Q96IS3 184 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 RAB40CQ96S21 281 aa12.64□□□□□ -0.39
SKP2-205ENST00000509692 I3L2K1 104 aa12.63□□□□□ -0.39
SKP2-205ENST00000509692 K7EIM0 57 aa12.63□□□□□ -0.39
SKP2-205ENST00000509692 CXCL3P19876 107 aa12.63□□□□□ -0.39
SKP2-205ENST00000509692 ATP5IP56385 69 aaPredicted RBP12.63□□□□□ -0.39
SKP2-205ENST00000509692 S100A10P60903 97 aa12.63□□□□□ -0.39
SKP2-205ENST00000509692 RRAS2P62070 204 aaPredicted RBP12.63□□□□□ -0.39
SKP2-205ENST00000509692 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
SKP2-205ENST00000509692 RAB32Q13637 225 aa12.63□□□□□ -0.39
SKP2-205ENST00000509692 OR11H7Q8NGC8 314 aa12.63□□□□□ -0.39
SKP2-205ENST00000509692 SMIM8Q96KF7 97 aa12.63□□□□□ -0.39
SKP2-205ENST00000509692 PSENENQ9NZ42 101 aa12.63□□□□□ -0.39
SKP2-205ENST00000509692 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.62□□□□□ -0.39
SKP2-205ENST00000509692 TRBV7-1A0A0A6YYK4 115 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 ANKRD34BA5PLL1 514 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 CCL24O00175 119 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 MT-CO2P00403 227 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 MYCNOSP40205 109 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 SPANXN5Q5MJ07 72 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 OR11H1Q8NG94 326 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 SCARB1Q8WTV0 552 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 WDR89Q96FK6 387 aaPredicted RBP12.62□□□□□ -0.39
SKP2-205ENST00000509692 PEF1Q9UBV8 284 aaKnown RBP12.62□□□□□ -0.39
SKP2-205ENST00000509692 PAIP2BQ9ULR5 123 aaKnown RBP12.62□□□□□ -0.39
SKP2-205ENST00000509692 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 H3BP45 60 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 L7N2F9 121 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 TMEM50AO95807 157 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 HSPB1P04792 205 aaKnown RBP12.62□□□□□ -0.39
SKP2-205ENST00000509692 OPRK1P41145 380 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 PAX9P55771 341 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 RAB11AP62491 216 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 VAMP2P63027 116 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 ZNF502Q8TBZ5 544 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 RNASEH2CQ8TDP1 164 aaKnown RBP12.62□□□□□ -0.39
SKP2-205ENST00000509692 CCDC140Q96MF4 163 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 OR4C12Q96R67 309 aa12.62□□□□□ -0.39
SKP2-205ENST00000509692 STRAPQ9Y3F4 350 aaKnown RBP12.62□□□□□ -0.39
SKP2-205ENST00000509692 IGHV4OR15-8A0A075B7B6 117 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms