RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 SPINK9Q5DT21 86 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 FCGR1BQ92637 280 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 PRNDQ9UKY0 176 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 DNAH17Q9UFH2 4485 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 DNAH2Q9P225 4427 aa11.55□□□□□ -0.56
RAB40C-202ENST00000509637 GPR31O00270 319 aa11.55□□□□□ -0.56
RAB40C-202ENST00000509637 SNAPC5O75971 98 aa11.55□□□□□ -0.56
RAB40C-202ENST00000509637 RPS19P39019 145 aaKnown RBP11.55□□□□□ -0.56
RAB40C-202ENST00000509637 MS4A6AQ9H2W1 248 aa11.55□□□□□ -0.56
RAB40C-202ENST00000509637 CYB5BO43169 146 aa11.54□□□□□ -0.56
RAB40C-202ENST00000509637 CA1P00915 261 aaPredicted RBP11.54□□□□□ -0.56
RAB40C-202ENST00000509637 HLA-DMAP28067 261 aa11.54□□□□□ -0.56
RAB40C-202ENST00000509637 HRH1P35367 487 aa11.54□□□□□ -0.56
RAB40C-202ENST00000509637 TBC1D26Q86UD7 250 aa11.54□□□□□ -0.56
RAB40C-202ENST00000509637 ZNF114Q8NC26 417 aa11.54□□□□□ -0.56
RAB40C-202ENST00000509637 TMEM56Q96MV1 263 aa11.54□□□□□ -0.56
RAB40C-202ENST00000509637 TXN2Q99757 166 aa11.54□□□□□ -0.56
RAB40C-202ENST00000509637 SCRT1Q9BWW7 348 aa11.54□□□□□ -0.56
RAB40C-202ENST00000509637 IFT46Q9NQC8 304 aa11.54□□□□□ -0.56
RAB40C-202ENST00000509637 DYNC1H1Q14204 4646 aaKnown RBP11.53□□□□□ -0.56
RAB40C-202ENST00000509637 ELOA3CA0A087WX78 387 aaPredicted RBP11.53□□□□□ -0.56
RAB40C-202ENST00000509637 A0A1B0GVY2 172 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 TMEM50AO95807 157 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 P0C879 139 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 C4BPBP20851 252 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 PRCDQ00LT1 54 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 RELQ04864 619 aaPredicted RBP11.53□□□□□ -0.56
RAB40C-202ENST00000509637 NEDD8Q15843 81 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 PVRIGQ6DKI7 326 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 OR5H2Q8NGV7 314 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 GPX8Q8TED1 209 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 C2CD4CQ8TF44 421 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 MRGPRFQ96AM1 343 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 PINX1Q96BK5 328 aaKnown RBP11.53□□□□□ -0.56
RAB40C-202ENST00000509637 FNDC4Q9H6D8 234 aaPredicted RBP11.53□□□□□ -0.56
RAB40C-202ENST00000509637 X6R8D5 127 aa11.53□□□□□ -0.56
RAB40C-202ENST00000509637 IGHV4-28A0A0C4DH34 117 aa11.52□□□□□ -0.57
RAB40C-202ENST00000509637 KNCNA6PVL3 124 aa11.52□□□□□ -0.57
RAB40C-202ENST00000509637 IGLL5B9A064 214 aa11.52□□□□□ -0.57
RAB40C-202ENST00000509637 IGKV1-5P01602 117 aa11.52□□□□□ -0.57
RAB40C-202ENST00000509637 EIF4EP06730 217 aaKnown RBP11.52□□□□□ -0.57
RAB40C-202ENST00000509637 PPP5CP53041 499 aa11.52□□□□□ -0.57
RAB40C-202ENST00000509637 HSPE1P61604 102 aaKnown RBP11.52□□□□□ -0.57
RAB40C-202ENST00000509637 TMEM187Q14656 261 aa11.52□□□□□ -0.57
RAB40C-202ENST00000509637 OR6F1Q8NGZ6 308 aa11.52□□□□□ -0.57
RAB40C-202ENST00000509637 YTHDF1Q9BYJ9 559 aaKnown RBP11.52□□□□□ -0.57
RAB40C-202ENST00000509637 FKBP11Q9NYL4 201 aa11.52□□□□□ -0.57
RAB40C-202ENST00000509637 PUS1Q9Y606 427 aaKnown RBP eCLIP11.52□□□□□ -0.57
RAB40C-202ENST00000509637 A0A0B4J293 547 aa11.51□□□□□ -0.57
RAB40C-202ENST00000509637 K7EQG2 157 aa11.51□□□□□ -0.57
RAB40C-202ENST00000509637 ST8SIA3O43173 380 aa11.51□□□□□ -0.57
RAB40C-202ENST00000509637 IFNA4P05014 189 aa11.51□□□□□ -0.57
RAB40C-202ENST00000509637 CMC4P56277 68 aaPredicted RBP11.51□□□□□ -0.57
RAB40C-202ENST00000509637 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
RAB40C-202ENST00000509637 SAMD12Q8N8I0 201 aa11.51□□□□□ -0.57
RAB40C-202ENST00000509637 CSNK1G2-AS1Q8NCQ2 148 aa11.51□□□□□ -0.57
RAB40C-202ENST00000509637 S100A16Q96FQ6 103 aaKnown RBP11.51□□□□□ -0.57
RAB40C-202ENST00000509637 C6orf62Q9GZU0 229 aaPredicted RBP11.51□□□□□ -0.57
RAB40C-202ENST00000509637 MFFQ9GZY8 342 aa11.51□□□□□ -0.57
RAB40C-202ENST00000509637 A0A0G2JRQ6 117 aa11.5□□□□□ -0.57
RAB40C-202ENST00000509637 GNG7O60262 68 aa11.5□□□□□ -0.57
RAB40C-202ENST00000509637 RNASE2P10153 161 aaKnown RBP11.5□□□□□ -0.57
RAB40C-202ENST00000509637 HLA-DMBP28068 263 aa11.5□□□□□ -0.57
RAB40C-202ENST00000509637 LSM3P62310 102 aaKnown RBP11.5□□□□□ -0.57
RAB40C-202ENST00000509637 UBE2NLQ5JXB2 153 aa11.5□□□□□ -0.57
RAB40C-202ENST00000509637 TMEM69Q5SWH9 247 aa11.5□□□□□ -0.57
RAB40C-202ENST00000509637 Q6ZTC4 211 aa11.5□□□□□ -0.57
RAB40C-202ENST00000509637 CMTM1Q8IZ96 169 aa11.5□□□□□ -0.57
RAB40C-202ENST00000509637 YIPF6Q96EC8 236 aa11.5□□□□□ -0.57
RAB40C-202ENST00000509637 FAM212BQ9NTI7 297 aaPredicted RBP11.5□□□□□ -0.57
RAB40C-202ENST00000509637 CELA1Q9UNI1 258 aa11.5□□□□□ -0.57
RAB40C-202ENST00000509637 PI3P19957 117 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 PRSS3P35030 304 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 TAS2R46P59540 309 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 H2BFWTQ7Z2G1 175 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 TSPAN14Q8NG11 270 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 OR4A16Q8NH70 328 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 BORCS5Q969J3 196 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 TSC22D3Q99576 134 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 CLEC5AQ9NY25 188 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 PKHD1P08F94 4074 aa11.49□□□□□ -0.57
RAB40C-202ENST00000509637 ZNF705EA8MWA4 302 aaPredicted RBP11.48□□□□□ -0.57
RAB40C-202ENST00000509637 M0QYG6 137 aa11.48□□□□□ -0.57
RAB40C-202ENST00000509637 UCP3P55916 312 aa11.48□□□□□ -0.57
RAB40C-202ENST00000509637 ZNF600Q6ZNG1 722 aa11.48□□□□□ -0.57
RAB40C-202ENST00000509637 Q6ZRM9 215 aa11.48□□□□□ -0.57
RAB40C-202ENST00000509637 ZNF767PQ75MW2 155 aa11.48□□□□□ -0.57
RAB40C-202ENST00000509637 DCANP1Q8TF63 244 aa11.48□□□□□ -0.57
RAB40C-202ENST00000509637 CMTM3Q96MX0 182 aa11.48□□□□□ -0.57
RAB40C-202ENST00000509637 TP53RKQ96S44 253 aa11.48□□□□□ -0.57
RAB40C-202ENST00000509637 HRH4Q9H3N8 390 aa11.48□□□□□ -0.57
RAB40C-202ENST00000509637 TRAV2A0A0B4J234 112 aa11.47□□□□□ -0.57
RAB40C-202ENST00000509637 DNASE2O00115 360 aaPredicted RBP11.47□□□□□ -0.57
RAB40C-202ENST00000509637 IGKV1-17P01599 117 aa11.47□□□□□ -0.57
RAB40C-202ENST00000509637 ETV6P41212 452 aa11.47□□□□□ -0.57
RAB40C-202ENST00000509637 DUSP18Q8NEJ0 188 aa11.47□□□□□ -0.57
RAB40C-202ENST00000509637 RABAC1Q9UI14 185 aa11.47□□□□□ -0.57
RAB40C-202ENST00000509637 U3KQE9 123 aa11.47□□□□□ -0.57
RAB40C-202ENST00000509637 IGHV4-4A0A075B6R2 117 aa11.46□□□□□ -0.57
RAB40C-202ENST00000509637 INS-IGF2F8WCM5 200 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms