RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TRAV14DV4A0A0A6YYC5 116 aa11.4□□□□□ -0.58
TPM3-219ENST00000509409 GNG7O60262 68 aa11.4□□□□□ -0.58
TPM3-219ENST00000509409 PRCDQ00LT1 54 aa11.4□□□□□ -0.58
TPM3-219ENST00000509409 TNFRSF9Q07011 255 aa11.4□□□□□ -0.58
TPM3-219ENST00000509409 SPINK9Q5DT21 86 aa11.4□□□□□ -0.58
TPM3-219ENST00000509409 APRG1Q8IVJ8 170 aa11.4□□□□□ -0.58
TPM3-219ENST00000509409 RNF183Q96D59 192 aa11.4□□□□□ -0.58
TPM3-219ENST00000509409 ALMS1Q8TCU4 4167 aa11.4□□□□□ -0.58
TPM3-219ENST00000509409 IGHV3OR16-13A0A075B7E8 117 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 IGHV3-74A0A0B4J1X5 117 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 LY6G6CO95867 125 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 PI3P19957 117 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 SNCAP37840 140 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 PAFAH1B2P68402 229 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 IZUMO4Q1ZYL8 232 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 GBGT1Q8N5D6 347 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 NXF2Q9GZY0 626 aaKnown RBP11.39□□□□□ -0.59
TPM3-219ENST00000509409 MAP6D1Q9H9H5 199 aa11.39□□□□□ -0.59
TPM3-219ENST00000509409 ATG12O94817 140 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 IFNA17P01571 189 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 FCGR2BP31994 310 aaPredicted RBP11.38□□□□□ -0.59
TPM3-219ENST00000509409 NPBWR1P48145 328 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 PIGPP57054 158 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 EWSR1Q01844 656 aaKnown RBP eCLIP11.38□□□□□ -0.59
TPM3-219ENST00000509409 RNASE10Q5GAN6 216 aaKnown RBP11.38□□□□□ -0.59
TPM3-219ENST00000509409 TMEM217Q8N7C4 229 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 SLC35G3Q8N808 338 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 ZNF114Q8NC26 417 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 DUSP18Q8NEJ0 188 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 OR10C1Q96KK4 312 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 PDCD10Q9BUL8 212 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 CSTL1Q9H114 145 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 KLK11Q9UBX7 282 aa11.38□□□□□ -0.59
TPM3-219ENST00000509409 NUPR2A6NF83 97 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 DNASE2O00115 360 aaPredicted RBP11.37□□□□□ -0.59
TPM3-219ENST00000509409 CD3DP04234 171 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 AKR1C2P52895 323 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 RND3P61587 244 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 RPL11P62913 178 aaKnown RBP11.37□□□□□ -0.59
TPM3-219ENST00000509409 ZNF124Q15973 351 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 TRIM16LQ309B1 348 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 CEMP1Q6PRD7 247 aaPredicted RBP11.37□□□□□ -0.59
TPM3-219ENST00000509409 AP3S1Q92572 193 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 ZNF486Q96H40 463 aaPredicted RBP11.37□□□□□ -0.59
TPM3-219ENST00000509409 GINS3Q9BRX5 216 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 ENY2Q9NPA8 101 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 COPZ2Q9P299 210 aa11.37□□□□□ -0.59
TPM3-219ENST00000509409 KLK5Q9Y337 293 aaPredicted RBP11.37□□□□□ -0.59
TPM3-219ENST00000509409 MPTX1A8MV57 137 aa11.36□□□□□ -0.59
TPM3-219ENST00000509409 ST8SIA3O43173 380 aa11.36□□□□□ -0.59
TPM3-219ENST00000509409 SUB1P53999 127 aaKnown RBP eCLIP11.36□□□□□ -0.59
TPM3-219ENST00000509409 TOMM20LQ6UXN7 152 aa11.36□□□□□ -0.59
TPM3-219ENST00000509409 TCF24Q7RTU0 167 aa11.36□□□□□ -0.59
TPM3-219ENST00000509409 OR52I2Q8NH67 350 aa11.36□□□□□ -0.59
TPM3-219ENST00000509409 RNASE11Q8TAA1 199 aaKnown RBP11.36□□□□□ -0.59
TPM3-219ENST00000509409 ZFAND1Q8TCF1 268 aa11.36□□□□□ -0.59
TPM3-219ENST00000509409 LINC00476Q8WZB0 136 aa11.36□□□□□ -0.59
TPM3-219ENST00000509409 EXTL2Q9UBQ6 330 aa11.36□□□□□ -0.59
TPM3-219ENST00000509409 A0A0B4J293 547 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 IGHV3-66A0A0C4DH42 116 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 C3orf85A0A1B0GTC6 90 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 IGKV1-5P01602 117 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 CD5P06127 495 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 ZNF182P17025 639 aaPredicted RBP11.35□□□□□ -0.59
TPM3-219ENST00000509409 ETV6P41212 452 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 HOXA1P49639 335 aaPredicted RBP11.35□□□□□ -0.59
TPM3-219ENST00000509409 PPP5CP53041 499 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 SP6Q3SY56 376 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 SCGB2B2Q4G0G5 96 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 ARRDC1Q8N5I2 433 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 CCDC71LQ8N9Z2 235 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 ST8SIA2Q92186 375 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 RRNAD1Q96FB5 475 aaKnown RBP11.35□□□□□ -0.59
TPM3-219ENST00000509409 ZNF414Q96IQ9 312 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 TP53RKQ96S44 253 aa11.35□□□□□ -0.59
TPM3-219ENST00000509409 PUS1Q9Y606 427 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM3-219ENST00000509409 TMEM50AO95807 157 aa11.34□□□□□ -0.59
TPM3-219ENST00000509409 FAM90A2PQ658T7 463 aa11.34□□□□□ -0.59
TPM3-219ENST00000509409 ZNF600Q6ZNG1 722 aa11.34□□□□□ -0.59
TPM3-219ENST00000509409 LHFPL1Q86WI0 220 aa11.34□□□□□ -0.59
TPM3-219ENST00000509409 TERB2Q8NHR7 220 aa11.34□□□□□ -0.59
TPM3-219ENST00000509409 C15orf40Q8WUR7 153 aa11.34□□□□□ -0.59
TPM3-219ENST00000509409 RARRES2Q99969 163 aa11.34□□□□□ -0.59
TPM3-219ENST00000509409 NAA50Q9GZZ1 169 aaKnown RBP11.34□□□□□ -0.59
TPM3-219ENST00000509409 MTFP1Q9UDX5 166 aa11.34□□□□□ -0.59
TPM3-219ENST00000509409 DFFBO76075 338 aa11.33□□□□□ -0.6
TPM3-219ENST00000509409 APOHP02749 345 aaPredicted RBP11.33□□□□□ -0.6
TPM3-219ENST00000509409 ATF4P18848 351 aaPredicted RBP11.33□□□□□ -0.6
TPM3-219ENST00000509409 TBPP20226 339 aa11.33□□□□□ -0.6
TPM3-219ENST00000509409 LILRB2Q8N423 598 aa11.33□□□□□ -0.6
TPM3-219ENST00000509409 TMEM229BQ8NBD8 167 aa11.33□□□□□ -0.6
TPM3-219ENST00000509409 GATAD1Q8WUU5 269 aa11.33□□□□□ -0.6
TPM3-219ENST00000509409 TMEM230Q96A57 120 aa11.33□□□□□ -0.6
TPM3-219ENST00000509409 ABHD1Q96SE0 405 aa11.33□□□□□ -0.6
TPM3-219ENST00000509409 MS4A6AQ9H2W1 248 aa11.33□□□□□ -0.6
TPM3-219ENST00000509409 TMEM231Q9H6L2 316 aa11.33□□□□□ -0.6
TPM3-219ENST00000509409 CORTO00230 105 aa11.32□□□□□ -0.6
TPM3-219ENST00000509409 SCGB2A1O75556 95 aa11.32□□□□□ -0.6
TPM3-219ENST00000509409 RAB3DO95716 219 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms