RNA–Protein interactions for RNA: ENST00000509366.5

GABRB1-203, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 1 (best)

Gene GABRB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-203ENST00000509366 RNF2Q99496 336 aa10.6□□□□□ -0.71
GABRB1-203ENST00000509366 NXF2Q9GZY0 626 aaKnown RBP10.6□□□□□ -0.71
GABRB1-203ENST00000509366 IGHV3-49A0A0A0MS15 119 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 CHEK1O14757 476 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 IGKV1-39P01597 117 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 IGKV1D-39P04432 117 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 CD5P06127 495 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 ATF4P18848 351 aaPredicted RBP10.59□□□□□ -0.71
GABRB1-203ENST00000509366 TBPP20226 339 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 NPBWR1P48145 328 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 TFPI2P48307 235 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 RND3P61587 244 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 ARRDC1Q8N5I2 433 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 SLC35G3Q8N808 338 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 DUSP18Q8NEJ0 188 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 OR10C1Q96KK4 312 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 PDCD10Q9BUL8 212 aa10.59□□□□□ -0.71
GABRB1-203ENST00000509366 EPPK1P58107 5090 aaKnown RBP10.59□□□□□ -0.71
GABRB1-203ENST00000509366 ALMS1Q8TCU4 4167 aa10.58□□□□□ -0.72
GABRB1-203ENST00000509366 IGKV3-7A0A075B6H7 116 aa10.58□□□□□ -0.72
GABRB1-203ENST00000509366 IFNA17P01571 189 aa10.58□□□□□ -0.72
GABRB1-203ENST00000509366 IGHV3-48P01763 117 aa10.58□□□□□ -0.72
GABRB1-203ENST00000509366 SUB1P53999 127 aaKnown RBP eCLIP10.58□□□□□ -0.72
GABRB1-203ENST00000509366 PIGPP57054 158 aa10.58□□□□□ -0.72
GABRB1-203ENST00000509366 RNASE12Q5GAN4 147 aaKnown RBP10.58□□□□□ -0.72
GABRB1-203ENST00000509366 APRG1Q8IVJ8 170 aa10.58□□□□□ -0.72
GABRB1-203ENST00000509366 C15orf40Q8WUR7 153 aa10.58□□□□□ -0.72
GABRB1-203ENST00000509366 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.72
GABRB1-203ENST00000509366 MAP6D1Q9H9H5 199 aa10.58□□□□□ -0.72
GABRB1-203ENST00000509366 KLK5Q9Y337 293 aaPredicted RBP10.58□□□□□ -0.72
GABRB1-203ENST00000509366 MPTX1A8MV57 137 aa10.57□□□□□ -0.72
GABRB1-203ENST00000509366 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
GABRB1-203ENST00000509366 TCF24Q7RTU0 167 aa10.57□□□□□ -0.72
GABRB1-203ENST00000509366 CCDC71LQ8N9Z2 235 aa10.57□□□□□ -0.72
GABRB1-203ENST00000509366 RNASE11Q8TAA1 199 aaKnown RBP10.57□□□□□ -0.72
GABRB1-203ENST00000509366 CSTL1Q9H114 145 aa10.57□□□□□ -0.72
GABRB1-203ENST00000509366 ENY2Q9NPA8 101 aa10.57□□□□□ -0.72
GABRB1-203ENST00000509366 COPZ2Q9P299 210 aa10.57□□□□□ -0.72
GABRB1-203ENST00000509366 KLK11Q9UBX7 282 aa10.57□□□□□ -0.72
GABRB1-203ENST00000509366 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 C3orf85A0A1B0GTC6 90 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 CORTO00230 105 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 ST8SIA3O43173 380 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 SCGB2A1O75556 95 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 LY6G6CO95867 125 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 PI3P19957 117 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 IZUMO4Q1ZYL8 232 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 TRIM16LQ309B1 348 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 SPINK9Q5DT21 86 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 TOMM20LQ6UXN7 152 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 ZNF600Q6ZNG1 722 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 LHFPL1Q86WI0 220 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 GBGT1Q8N5D6 347 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 OR52I2Q8NH67 350 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 ZFAND1Q8TCF1 268 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 RRNAD1Q96FB5 475 aaKnown RBP10.56□□□□□ -0.72
GABRB1-203ENST00000509366 TMEM231Q9H6L2 316 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 EXTL2Q9UBQ6 330 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 MTFP1Q9UDX5 166 aa10.56□□□□□ -0.72
GABRB1-203ENST00000509366 BIRC6Q9NR09 4857 aa10.55□□□□□ -0.72
GABRB1-203ENST00000509366 INS-IGF2F8WCM5 200 aa10.55□□□□□ -0.72
GABRB1-203ENST00000509366 DNASE2O00115 360 aaPredicted RBP10.55□□□□□ -0.72
GABRB1-203ENST00000509366 B3GALNT1O75752 331 aa10.55□□□□□ -0.72
GABRB1-203ENST00000509366 IGKV1-5P01602 117 aa10.55□□□□□ -0.72
GABRB1-203ENST00000509366 CD3DP04234 171 aa10.55□□□□□ -0.72
GABRB1-203ENST00000509366 ZNF182P17025 639 aaPredicted RBP10.55□□□□□ -0.72
GABRB1-203ENST00000509366 HOXA1P49639 335 aaPredicted RBP10.55□□□□□ -0.72
GABRB1-203ENST00000509366 PPP5CP53041 499 aa10.55□□□□□ -0.72
GABRB1-203ENST00000509366 RPL11P62913 178 aaKnown RBP10.55□□□□□ -0.72
GABRB1-203ENST00000509366 FAM90A2PQ658T7 463 aa10.55□□□□□ -0.72
GABRB1-203ENST00000509366 GATAD1Q8WUU5 269 aa10.55□□□□□ -0.72
GABRB1-203ENST00000509366 TP53RKQ96S44 253 aa10.55□□□□□ -0.72
GABRB1-203ENST00000509366 A0A0B4J293 547 aa10.54□□□□□ -0.72
GABRB1-203ENST00000509366 ETV6P41212 452 aa10.54□□□□□ -0.72
GABRB1-203ENST00000509366 TAS2R19P59542 299 aa10.54□□□□□ -0.72
GABRB1-203ENST00000509366 EWSR1Q01844 656 aaKnown RBP eCLIP10.54□□□□□ -0.72
GABRB1-203ENST00000509366 SCGB2B2Q4G0G5 96 aa10.54□□□□□ -0.72
GABRB1-203ENST00000509366 TERB2Q8NHR7 220 aa10.54□□□□□ -0.72
GABRB1-203ENST00000509366 ST8SIA2Q92186 375 aa10.54□□□□□ -0.72
GABRB1-203ENST00000509366 ZNF414Q96IQ9 312 aa10.54□□□□□ -0.72
GABRB1-203ENST00000509366 RARRES2Q99969 163 aa10.54□□□□□ -0.72
GABRB1-203ENST00000509366 PUS1Q9Y606 427 aaKnown RBP eCLIP10.54□□□□□ -0.72
GABRB1-203ENST00000509366 HYDINQ4G0P3 5121 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 A0A1W2PS18 150 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 DFFBO76075 338 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 GABARAPO95166 117 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 RAB3DO95716 219 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 TMEM50AO95807 157 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 P0C879 139 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 ZNF124Q15973 351 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 SP6Q3SY56 376 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 TMEM229BQ8NBD8 167 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 OR13C8Q8NGS7 320 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 NARS2Q96I59 477 aaKnown RBP10.53□□□□□ -0.72
GABRB1-203ENST00000509366 MS4A6AQ9H2W1 248 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 VSIRQ9H7M9 311 aa10.53□□□□□ -0.72
GABRB1-203ENST00000509366 IGHV3-66A0A0C4DH42 116 aa10.52□□□□□ -0.73
GABRB1-203ENST00000509366 RNASE2P10153 161 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms