RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 GGACTQ9BVM4 153 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 NPCDR1Q9BY65 106 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 C20orf85Q9H1P6 137 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 CHST2Q9Y4C5 530 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 H3BMG7 143 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 CXCL12P48061 93 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 TFPI2P48307 235 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 SNRPGP62308 76 aaKnown RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 PLPPR5Q32ZL2 321 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 OR11H6Q8NGC7 330 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 OR4X1Q8NH49 305 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 TSPAN32Q96QS1 320 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF703Q9H7S9 590 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 VAX2Q9UIW0 290 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 CSAG2Q9Y5P2 127 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 TRAV13-1A0A0B4J241 112 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 NKX2-6A6NCS4 301 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 TMEM262E9PQX1 116 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF682O95780 498 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 HLA-DQB1P01920 261 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 AZU1P20160 251 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 OPRK1P41145 380 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 UBE2L3P68036 154 aaKnown RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ATP5G2Q06055 141 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF260Q3ZCT1 412 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 S100A7L2Q5SY68 101 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 AWAT2Q6E213 333 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 OR8B12Q8NGG6 310 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 KIR2DL4Q99706 377 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 SLC25A21Q9BQT8 299 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF443Q9Y2A4 671 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 LOC100131303A0A0U1RQF7 123 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF727A8MUV8 499 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 LEUTXA8MZ59 168 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 RBFOX2O43251 390 aaKnown RBP eCLIP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 MAS1P04201 325 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 HLA-DOBP13765 273 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF19P17023 458 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 TSPOP30536 169 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 SLC25A1P53007 311 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 P2RY6Q15077 328 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 IQCJQ1A5X6 159 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 Q6Q795 121 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 Q6ZT83 130 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 FAM19A5Q7Z5A7 132 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 MAPKAPK5-AS1Q8N8E1 139 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 OR5AK2Q8NH90 309 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 LMX1AQ8TE12 382 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 SAMD10Q9BYL1 202 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 H0YGG7 62 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 LYRM1O43325 122 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 FOXS1O43638 330 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 GPR75O95800 540 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 TRACP01848 142 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 DAPP51397 102 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF133P52736 654 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 Q8NA96 180 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 SIGLEC7Q9Y286 467 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 EXPH5Q8NEV8 1989 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 C4orf51C9J302 202 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 GCM2O75603 506 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF141Q15928 474 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 RSPO4Q2I0M5 234 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 PCSK4Q6UW60 755 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 TRPT1Q86TN4 253 aaKnown RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 DAND5Q8N907 189 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-209ENST00000508871 THEM6Q8WUY1 208 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 HBEGFQ99075 208 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 HEXA-AS1Q9H8Q6 139 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 ANAPC10Q9UM13 185 aa3.18□□□□□ -1.9
NEDD4-209ENST00000508871 A0A1W2PQD3 144 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 ISLRO14498 428 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF17P17021 662 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 RHOGP84095 191 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 C12orf73Q69YU5 71 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 REG3GQ6UW15 175 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 Q6ZS52 159 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 SCXQ7RTU7 201 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 SPICQ8N5J4 248 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00482Q8N8I6 264 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 MRPL30Q8TCC3 161 aaKnown RBP3.17□□□□□ -1.9
NEDD4-209ENST00000508871 C18orf15Q96N68 181 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 TM2D1Q9BX74 207 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 NAT8BQ9UHF3 227 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 TMX2-CTNND1H3BSU7 103 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 CTSDP07339 412 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-209ENST00000508871 SPINK8P0C7L1 97 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 IL9P15248 144 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF239Q16600 458 aaKnown RBP3.17□□□□□ -1.9
NEDD4-209ENST00000508871 TMEM42Q69YG0 159 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF66Q6ZN08 573 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 SYT8Q8NBV8 401 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 MORN4Q8NDC4 146 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 OR52P1PQ8NH57 321 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 CHST6Q9GZX3 395 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 ARRDC1-AS1Q9H2J1 176 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 IDI2-AS1Q9NZ38 188 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 FAM183AA6NL82 134 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 PDCD6O75340 191 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms