RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ATG5Q9H1Y0 275 aa6.28□□□□□ -1.4
COL4A3BP-206ENST00000508809 HRASLSQ9HDD0 168 aa6.28□□□□□ -1.4
COL4A3BP-206ENST00000508809 CCL28Q9NRJ3 127 aa6.28□□□□□ -1.4
COL4A3BP-206ENST00000508809 SMPXQ9UHP9 88 aa6.28□□□□□ -1.4
COL4A3BP-206ENST00000508809 APLNQ9ULZ1 77 aa6.28□□□□□ -1.4
COL4A3BP-206ENST00000508809 TEX50A0A1B0GTY4 177 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 TRDV1A0A1B0GX56 115 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 TMEM235A6NFC5 223 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 EBAG9O00559 213 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 CYB5BO43169 146 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 CTSGP08311 255 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 MFAP2P55001 183 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 WT1-ASQ06250 92 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 FAM90A2PQ658T7 463 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 SLC25A24Q6NUK1 477 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 HSD17B13Q7Z5P4 300 aaPredicted RBP6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 GVQW1Q8N7I0 195 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 OR11H2Q8NH07 326 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 OR5B3Q8NH48 314 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 SCARB1Q8WTV0 552 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 NUDCD2Q8WVJ2 157 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 RNF2Q99496 336 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 COMMD5Q9GZQ3 224 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 PLEKHA2Q9HB19 425 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 NDUFA4L2Q9NRX3 87 aa6.27□□□□□ -1.41
COL4A3BP-206ENST00000508809 IGHV7-4-1A0A0J9YVY3 117 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 A0A1B0GVY2 172 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 K7EIM0 57 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 SULT1C2O00338 296 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 CHEK1O14757 476 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 TNFSF12O43508 249 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 SCGNO76038 276 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 TRAPPC2P0DI81 140 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 TRAPPC2BP0DI82 140 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 OR13C7P0DN81 318 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 MYL9P24844 172 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 FCGR2CP31995 323 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 LINC00336Q6ZUF6 198 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 OR1L8Q8NGR8 309 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 SECTM1Q8WVN6 248 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 OR10C1Q96KK4 312 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 C20orf24Q9BUV8 137 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 VCXQ9H320 206 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 HRH4Q9H3N8 390 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 C21orf62Q9NYP8 219 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 FBXL17Q9UF56 701 aa6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 F11RQ9Y624 299 aaKnown RBP6.26□□□□□ -1.41
COL4A3BP-206ENST00000508809 IGHV3OR16-8A0A075B7F1 116 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 C11orf94C9JXX5 98 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 ZNF207O43670 478 aaKnown RBP6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 PPYP01298 95 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 HNRNPCP07910 306 aaKnown RBP eCLIP6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 PTHLHP12272 177 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 GNG2P59768 71 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 RAB32Q13637 225 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 TBCEQ15813 527 aaPredicted RBP6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 BEST4Q8NFU0 473 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 OR13F1Q8NGS4 319 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 GIMAP1Q8WWP7 306 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 DGCR14Q96DF8 476 aaKnown RBP6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 RHPN1-AS1Q9BWJ2 59 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 CCDC90BQ9GZT6 254 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 NDUFB11Q9NX14 153 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 COMMD9Q9P000 198 aa6.25□□□□□ -1.41
COL4A3BP-206ENST00000508809 IGHV3-21A0A0B4J1V1 117 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 C15orf61A6NNL5 157 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 IGLL5B9A064 214 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 MRPS14O60783 128 aaKnown RBP6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 CD5P06127 495 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 FGF9P31371 208 aaPredicted RBP6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 UCP3P55916 312 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 CATR1Q13166 79 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 TMEM187Q14656 261 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 C22orf42Q6IC83 251 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 ZNF818PQ6ZRF7 136 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 ZNF367Q7RTV3 350 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 HOGA1Q86XE5 327 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 Q8NAQ8 132 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 TMEM116Q8NCL8 245 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 DMBX1Q8NFW5 382 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 LSM10Q969L4 123 aaKnown RBP6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 TXN2Q99757 166 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 SLC5A7Q9GZV3 580 aa6.24□□□□□ -1.41
COL4A3BP-206ENST00000508809 APOBP04114 4563 aaKnown RBP6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 TRAV14DV4A0A0A6YYC5 116 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 I3L2K1 104 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 DEFB4AO15263 64 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 NUPL2O15504 423 aaKnown RBP6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 DFFBO76075 338 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 CA1P00915 261 aaPredicted RBP6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 GIG44P09565 113 aaPredicted RBP6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 F2RP25116 425 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 GNRHRP30968 328 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 AQP4P55087 323 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 ARPC4P59998 168 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 PAFAH1B2P68402 229 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 RELQ04864 619 aaPredicted RBP6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 Q56UQ5 140 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 UBAC2Q8NBM4 344 aa6.23□□□□□ -1.41
COL4A3BP-206ENST00000508809 OR1P1Q8NH06 330 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms