RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 TMEM65Q6PI78 240 aa16.2■□□□□ 0.18
HOXC9-203ENST00000508190 AKAP14Q86UN6 197 aa16.2■□□□□ 0.18
HOXC9-203ENST00000508190 STRAPQ9Y3F4 350 aaKnown RBP16.2■□□□□ 0.18
HOXC9-203ENST00000508190 IGHV3-21A0A0B4J1V1 117 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 E5RGE8 158 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 NDUFB8O95169 186 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 LY86O95711 162 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 CAV2P51636 162 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 KLK9Q2XQG4 91 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 PVRIGQ6DKI7 326 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 OR4X2Q8NGF9 303 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 WFDC12Q8WWY7 111 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 PINX1Q96BK5 328 aaKnown RBP16.19■□□□□ 0.18
HOXC9-203ENST00000508190 LYRM2Q9NU23 88 aaPredicted RBP16.19■□□□□ 0.18
HOXC9-203ENST00000508190 FBXL7Q9UJT9 491 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 KLK9Q9UKQ9 250 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 S4R3C0 116 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 BRI3O95415 125 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 OR8U8P0C7N1 319 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 METTL15P1P0C7V9 234 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 HIST1H1BP16401 226 aaKnown RBP16.19■□□□□ 0.18
HOXC9-203ENST00000508190 RPP30P78346 268 aaKnown RBP16.19■□□□□ 0.18
HOXC9-203ENST00000508190 FGL1Q08830 312 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 COMMD1Q8N668 190 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 RNF152Q8N8N0 203 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 OR1L6Q8NGR2 347 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 THAP6Q8TBB0 222 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 DCUN1D4Q92564 292 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 SLA2Q9H6Q3 261 aa16.19■□□□□ 0.18
HOXC9-203ENST00000508190 IGSF23A1L1A6 192 aa16.18■□□□□ 0.18
HOXC9-203ENST00000508190 IFNA4P05014 189 aa16.18■□□□□ 0.18
HOXC9-203ENST00000508190 LYL1P12980 280 aa16.18■□□□□ 0.18
HOXC9-203ENST00000508190 KIAA0141Q14154 515 aaPredicted RBP16.18■□□□□ 0.18
HOXC9-203ENST00000508190 TMEM14EPQ6UXP3 125 aa16.18■□□□□ 0.18
HOXC9-203ENST00000508190 MYOZ3Q8TDC0 251 aa16.18■□□□□ 0.18
HOXC9-203ENST00000508190 TENM1Q9UKZ4 2725 aa16.18■□□□□ 0.18
HOXC9-203ENST00000508190 MFSD2BA6NFX1 497 aa16.17■□□□□ 0.18
HOXC9-203ENST00000508190 IGHV3-48P01763 117 aa16.17■□□□□ 0.18
HOXC9-203ENST00000508190 MLANAQ16655 118 aa16.17■□□□□ 0.18
HOXC9-203ENST00000508190 C15orf32Q32M92 178 aa16.17■□□□□ 0.18
HOXC9-203ENST00000508190 ETV3LQ6ZN32 361 aa16.17■□□□□ 0.18
HOXC9-203ENST00000508190 NECAP1Q8NC96 275 aa16.17■□□□□ 0.18
HOXC9-203ENST00000508190 FNDC4Q9H6D8 234 aaPredicted RBP16.17■□□□□ 0.18
HOXC9-203ENST00000508190 FXYD6-FXYD2A0A087WZ82 144 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 FAM223BA6NKX1 122 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 PMS2P5A8MQ11 134 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 I3L2K1 104 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 K7EIM0 57 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 CYB5BO43169 146 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 MT-CO2P00403 227 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 IGHV3-23P01764 117 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 OPRK1P41145 380 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 P2RY1P47900 373 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 RAB11AP62491 216 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 KHDC1LQ5JSQ8 128 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 OR8G2PQ6IF36 304 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 HAPLN4Q86UW8 402 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 FAM223AQ8IWN6 122 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 TMEM252Q8N6L7 170 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 CITED2Q99967 270 aaPredicted RBP16.16■□□□□ 0.18
HOXC9-203ENST00000508190 NEURL2Q9BR09 285 aa16.16■□□□□ 0.18
HOXC9-203ENST00000508190 PRSS46E5RG02 174 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 CST7O76096 145 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 IGHV3-11P01762 117 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 SLC25A4P12235 298 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 ATP5IP56385 69 aaPredicted RBP16.15■□□□□ 0.18
HOXC9-203ENST00000508190 RIPPLY3P57055 190 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 ARL16Q0P5N6 197 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 C18orf65Q6ZTR6 163 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 NOXA1Q86UR1 476 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 TCTE3Q8IZS6 198 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 ZNF491Q8N8L2 437 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 RNASEH2CQ8TDP1 164 aaKnown RBP16.15■□□□□ 0.18
HOXC9-203ENST00000508190 THYN1Q9P016 225 aa16.15■□□□□ 0.18
HOXC9-203ENST00000508190 TCRBV4S1A1TA0A5B7 111 aa16.14■□□□□ 0.18
HOXC9-203ENST00000508190 CORTO00230 105 aa16.14■□□□□ 0.18
HOXC9-203ENST00000508190 ATP5G2Q06055 141 aa16.14■□□□□ 0.18
HOXC9-203ENST00000508190 GNB4Q9HAV0 340 aa16.14■□□□□ 0.18
HOXC9-203ENST00000508190 EWSR1Q01844 656 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■■■□ 20.8
HOXC9-203ENST00000508190 EXOSC2Q13868 293 aaKnown RBP16.14■□□□□ 0.17
HOXC9-203ENST00000508190 TMEM217Q8N7C4 229 aa16.14■□□□□ 0.17
HOXC9-203ENST00000508190 OR11H4Q8NGC9 324 aa16.14■□□□□ 0.17
HOXC9-203ENST00000508190 SCARB1Q8WTV0 552 aa16.14■□□□□ 0.17
HOXC9-203ENST00000508190 BSCL2Q96G97 398 aaPredicted RBP16.14■□□□□ 0.17
HOXC9-203ENST00000508190 USMG5Q96IX5 58 aa16.14■□□□□ 0.17
HOXC9-203ENST00000508190 OR5B12Q96R08 314 aa16.14■□□□□ 0.17
HOXC9-203ENST00000508190 MRPL36Q9P0J6 103 aaKnown RBP16.14■□□□□ 0.17
HOXC9-203ENST00000508190 A0A1W2PRX2 142 aa16.13■□□□□ 0.17
HOXC9-203ENST00000508190 CD69Q07108 199 aa16.13■□□□□ 0.17
HOXC9-203ENST00000508190 A0A0G2JLM5 398 aa16.12■□□□□ 0.17
HOXC9-203ENST00000508190 RPL12P30050 165 aaKnown RBP16.12■□□□□ 0.17
HOXC9-203ENST00000508190 SULT1A1P50225 295 aa16.12■□□□□ 0.17
HOXC9-203ENST00000508190 NHLH2Q02577 135 aa16.12■□□□□ 0.17
HOXC9-203ENST00000508190 SLC16A13Q7RTY0 426 aa16.12■□□□□ 0.17
HOXC9-203ENST00000508190 UBE2E2Q96LR5 201 aa16.12■□□□□ 0.17
HOXC9-203ENST00000508190 CCDC140Q96MF4 163 aa16.12■□□□□ 0.17
HOXC9-203ENST00000508190 SLC25A31Q9H0C2 315 aa16.12■□□□□ 0.17
HOXC9-203ENST00000508190 ACOT7LQ6ZUV0 252 aa16.11■□□□□ 0.17
HOXC9-203ENST00000508190 ZNF546Q86UE3 836 aa16.11■□□□□ 0.17
HOXC9-203ENST00000508190 STX12Q86Y82 276 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms