RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 PRR20AP86496 221 aa13.2□□□□□ -0.3
DDX41-207ENST00000507900 SLC35E1Q96K37 410 aa13.2□□□□□ -0.3
DDX41-207ENST00000507900 EIF5A2Q9GZV4 153 aaKnown RBP13.2□□□□□ -0.3
DDX41-207ENST00000507900 SLC39A9Q9NUM3 307 aa13.2□□□□□ -0.3
DDX41-207ENST00000507900 F11RQ9Y624 299 aaKnown RBP13.2□□□□□ -0.3
DDX41-207ENST00000507900 TRAV20A0A0B4J274 112 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 CORTO00230 105 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 APOC3P02656 99 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 CRYGCP07315 174 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 SFTA3P0C7M3 94 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 TMEM11P17152 192 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 TMEM249Q2WGJ8 235 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 DEFB113Q30KQ7 82 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 ZNF506Q5JVG8 444 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 MIC13Q5XKP0 118 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 LCN15Q6UWW0 184 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 FNDC4Q9H6D8 234 aaPredicted RBP13.19□□□□□ -0.3
DDX41-207ENST00000507900 SLC45A2Q9UMX9 530 aa13.19□□□□□ -0.3
DDX41-207ENST00000507900 SPG11Q96JI7 2443 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 CHD6Q8TD26 2715 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 IGKV1OR2-108A0A075B7D4 117 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 F8W036 122 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 TSPAN9O75954 239 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 REG1AP05451 166 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 MFAP2P55001 183 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 B2MP61769 119 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 ETFRF1Q6IPR1 90 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 STPG3Q8N7X2 389 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 RAB24Q969Q5 203 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 SLC25A22Q9H936 323 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 C1RLQ9NZP8 487 aa13.18□□□□□ -0.3
DDX41-207ENST00000507900 CNIH1O95406 144 aa13.17□□□□□ -0.3
DDX41-207ENST00000507900 CDC34P49427 236 aaPredicted RBP13.17□□□□□ -0.3
DDX41-207ENST00000507900 FXYD3Q14802 87 aa13.17□□□□□ -0.3
DDX41-207ENST00000507900 MLANAQ16655 118 aa13.17□□□□□ -0.3
DDX41-207ENST00000507900 KHDC3LQ587J8 217 aa13.17□□□□□ -0.3
DDX41-207ENST00000507900 FAM122CQ6P4D5 195 aa13.17□□□□□ -0.3
DDX41-207ENST00000507900 ZNF562Q6V9R5 426 aa13.17□□□□□ -0.3
DDX41-207ENST00000507900 SSMEM1Q8WWF3 244 aa13.17□□□□□ -0.3
DDX41-207ENST00000507900 TRAV40A0A0B4J280 105 aa13.16□□□□□ -0.3
DDX41-207ENST00000507900 LOC102723971A0A1B0GUV8 181 aa13.16□□□□□ -0.3
DDX41-207ENST00000507900 LINC00869P0C866 280 aa13.16□□□□□ -0.3
DDX41-207ENST00000507900 LOXL1Q08397 574 aaPredicted RBP13.16□□□□□ -0.3
DDX41-207ENST00000507900 ICAM4Q14773 271 aa13.16□□□□□ -0.3
DDX41-207ENST00000507900 THAP8Q8NA92 274 aa13.16□□□□□ -0.3
DDX41-207ENST00000507900 MBD6Q96DN6 1003 aa13.16□□□□□ -0.3
DDX41-207ENST00000507900 PSMG3-AS1Q96PY0 264 aa13.16□□□□□ -0.3
DDX41-207ENST00000507900 RARRES2Q99969 163 aa13.16□□□□□ -0.3
DDX41-207ENST00000507900 SLC35B3Q9H1N7 401 aa13.16□□□□□ -0.3
DDX41-207ENST00000507900 USP9YO00507 2555 aaPredicted RBP13.16□□□□□ -0.3
DDX41-207ENST00000507900 HSPB1P04792 205 aaKnown RBP13.15□□□□□ -0.3
DDX41-207ENST00000507900 BCL2P10415 239 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 CTRB1P17538 263 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 FGF8P55075 233 aaPredicted RBP13.15□□□□□ -0.3
DDX41-207ENST00000507900 GCSAMLQ5JQS6 135 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 FAM120AOSQ5T036 256 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 SVBPQ8N300 66 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 Q8N9W7 124 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 LINC01356Q8N9X3 169 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 OR1L6Q8NGR2 347 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 OR2T6Q8NHC8 308 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 MEGF9Q9H1U4 602 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 C7orf69Q9H7B7 122 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
DDX41-207ENST00000507900 HLA-DRB1P01911 266 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 OR10J1P30954 320 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 PPT1P50897 306 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 CX3CL1P78423 397 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 HAGHQ16775 308 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 RUSC1-AS1Q66K80 236 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 ARPC1AQ92747 370 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 HIF1ANQ9NWT6 349 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 GNG13Q9P2W3 67 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 DMRT1Q9Y5R6 373 aa13.15□□□□□ -0.3
DDX41-207ENST00000507900 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
DDX41-207ENST00000507900 NPIPB5A8MRT5 1133 aa13.14□□□□□ -0.31
DDX41-207ENST00000507900 IFNA1P01562 189 aa13.14□□□□□ -0.31
DDX41-207ENST00000507900 TAGLN2P37802 199 aaKnown RBP13.14□□□□□ -0.31
DDX41-207ENST00000507900 DEFA5Q01523 94 aa13.14□□□□□ -0.31
DDX41-207ENST00000507900 TMEM116Q8NCL8 245 aa13.14□□□□□ -0.31
DDX41-207ENST00000507900 ABHD5Q8WTS1 349 aa13.14□□□□□ -0.31
DDX41-207ENST00000507900 MISP3Q96FF7 219 aa13.14□□□□□ -0.31
DDX41-207ENST00000507900 ACY3Q96HD9 319 aa13.14□□□□□ -0.31
DDX41-207ENST00000507900 IGKV1D-37A0A075B6S9 117 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 A0A1W2PPV4 95 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 J3QLI3 93 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 NDUFS6O75380 124 aaKnown RBP13.13□□□□□ -0.31
DDX41-207ENST00000507900 SCO1O75880 301 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 SRP19P09132 144 aaKnown RBP13.13□□□□□ -0.31
DDX41-207ENST00000507900 APELAP0DMC3 54 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 IGHV4-38-2P0DP08 117 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 DEFA4P12838 97 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 GUCA2BQ16661 112 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 CYP2G1PQ6ZSU1 146 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 NPIPB3Q92617 1050 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 C19orf24Q9BVV8 132 aa13.13□□□□□ -0.31
DDX41-207ENST00000507900 MRPL36Q9P0J6 103 aaKnown RBP13.13□□□□□ -0.31
DDX41-207ENST00000507900 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.12□□□□□ -0.311e-14■■■■□ 19.6
DDX41-207ENST00000507900 TCRBV4S1A1TA0A5B7 111 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms