RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 HSD17B12Q53GQ0 312 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 RBM48Q5RL73 367 aaKnown RBP4.84□□□□□ -1.63
NR1I3-224ENST00000507215 C10orf55Q5SWW7 151 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 C1orf134Q5TEV5 83 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 OR10K2Q6IF99 312 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 H1FOOQ8IZA3 346 aaPredicted RBP4.84□□□□□ -1.63
NR1I3-224ENST00000507215 CBR4Q8N4T8 237 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 MAPKAPK5-AS1Q8N8E1 139 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 ZNF485Q8NCK3 441 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 ARHGAP5-AS1Q96IT6 56 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 PECRQ9BY49 303 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 COMMD5Q9GZQ3 224 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 RNF167Q9H6Y7 350 aa4.84□□□□□ -1.63
NR1I3-224ENST00000507215 PKD1P98161 4303 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 A0A0A6YYD4 124 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 MFSD2BA6NFX1 497 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 ZNF705EA8MWA4 302 aaPredicted RBP4.83□□□□□ -1.64
NR1I3-224ENST00000507215 C16orf90A8MZG2 172 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 USP17L23D6RBM5 183 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 SOCS1O15524 211 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 RBFOX2O43251 390 aaKnown RBP eCLIP4.83□□□□□ -1.64
NR1I3-224ENST00000507215 WBP4O75554 376 aaKnown RBP4.83□□□□□ -1.64
NR1I3-224ENST00000507215 CD74P04233 296 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 EIF4EP06730 217 aaKnown RBP4.83□□□□□ -1.64
NR1I3-224ENST00000507215 FCGR3AP08637 254 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 AREGP15514 252 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 CRHBPP24387 322 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 TALDO1P37837 337 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 WNT4P56705 351 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 ARPC4P59998 168 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 ACSM3Q53FZ2 586 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 Q6ZR54 194 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 Q6ZTC4 211 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 LRRTM1Q86UE6 522 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 APRG1Q8IVJ8 170 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 UBE2DNLQ8IWF7 75 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 STHQ8IWL8 128 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 GDPD1Q8N9F7 314 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 TMEM116Q8NCL8 245 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 APH1BQ8WW43 257 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 RAB3CQ96E17 227 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 GINS3Q9BRX5 216 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 HDHD3Q9BSH5 251 aaPredicted RBP4.83□□□□□ -1.64
NR1I3-224ENST00000507215 C20orf24Q9BUV8 137 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 C1QTNF4Q9BXJ3 329 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 TMEM231Q9H6L2 316 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 PLGRKTQ9HBL7 147 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 C21orf62Q9NYP8 219 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 AASSQ9UDR5 926 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 SMPXQ9UHP9 88 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 RBMX2Q9Y388 322 aaKnown RBP4.83□□□□□ -1.64
NR1I3-224ENST00000507215 OR2W1Q9Y3N9 320 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 HERC1Q15751 4861 aa4.83□□□□□ -1.64
NR1I3-224ENST00000507215 HSPG2P98160 4391 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 IGHV7-4-1A0A0J9YVY3 117 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 A0A1B0GUV1 79 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TMEM189A5PLL7 270 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 OR2T8A6NH00 312 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 CHEK1O14757 476 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 NUPL2O15504 423 aaKnown RBP4.82□□□□□ -1.64
NR1I3-224ENST00000507215 ARL6IP5O75915 188 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 S1PR2O95136 353 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 HLA-DQB1P01920 261 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 DTYMKP23919 212 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 PSMA1P25786 263 aaKnown RBP4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TMEM50BP56557 158 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TAS2R31P59538 309 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 OR2B8PP59922 312 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 NUTF2P61970 127 aaKnown RBP4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TRAM1Q15629 374 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TBCEQ15813 527 aaPredicted RBP4.82□□□□□ -1.64
NR1I3-224ENST00000507215 RAB11BQ15907 218 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 IZUMO4Q1ZYL8 232 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 KCTD21Q4G0X4 260 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 IGSF11Q5DX21 431 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 WDR73Q6P4I2 378 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 SSX9Q7RTT3 188 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 ZFP41Q8N8Y5 198 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 DUSP18Q8NEJ0 188 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TCTEX1D2Q8WW35 142 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 GIMAP1Q8WWP7 306 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 BORCS5Q969J3 196 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 DGCR14Q96DF8 476 aaKnown RBP4.82□□□□□ -1.64
NR1I3-224ENST00000507215 OR10C1Q96KK4 312 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TXN2Q99757 166 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 RHPN1-AS1Q9BWJ2 59 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 HRASLSQ9HDD0 168 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 C8orf4Q9NR00 106 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TMEM14BQ9NUH8 114 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 CLEC2DQ9UHP7 191 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 RAB22AQ9UL26 194 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TBC1D24Q9ULP9 559 aa4.82□□□□□ -1.64
NR1I3-224ENST00000507215 TRAV14DV4A0A0A6YYC5 116 aa4.81□□□□□ -1.64
NR1I3-224ENST00000507215 IGLC7A0M8Q6 106 aa4.81□□□□□ -1.64
NR1I3-224ENST00000507215 METTL21EPA6NDL7 271 aa4.81□□□□□ -1.64
NR1I3-224ENST00000507215 DNASE2O00115 360 aaPredicted RBP4.81□□□□□ -1.64
NR1I3-224ENST00000507215 DEFB4AO15263 64 aa4.81□□□□□ -1.64
NR1I3-224ENST00000507215 DENRO43583 198 aaKnown RBP4.81□□□□□ -1.64
NR1I3-224ENST00000507215 UCHL1P09936 223 aa4.81□□□□□ -1.64
NR1I3-224ENST00000507215 NQO2P16083 231 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms