RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 DNAH2Q9P225 4427 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 MEIS3P1A6NDR6 274 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 C15orf61A6NNL5 157 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 K7EIM0 57 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 CASQ2O14958 399 aaPredicted RBP4.16□□□□□ -1.74
GYPB-208ENST00000507009 SSX5O60225 188 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 SNAPC5O75971 98 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 HPRT1P00492 218 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 KRASP01116 189 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 PPYP01298 95 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 RLN1P04808 185 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 CTSGP08311 255 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 MIFP14174 115 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 HTN3P15516 51 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 C4BPBP20851 252 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 PSMA1P25786 263 aaKnown RBP4.16□□□□□ -1.74
GYPB-208ENST00000507009 G6PCP35575 357 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 MFAP4P55083 255 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 SUMO1P63165 101 aaKnown RBP4.16□□□□□ -1.74
GYPB-208ENST00000507009 ARL6IP1Q15041 203 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 KLK9Q2XQG4 91 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 C12orf74Q32Q52 190 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 ACTL10Q5JWF8 245 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 UBE2UQ5VVX9 321 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 C22orf42Q6IC83 251 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 PACRGLQ8N7B6 248 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 CHAC2Q8WUX2 184 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 LSM10Q969L4 123 aaKnown RBP4.16□□□□□ -1.74
GYPB-208ENST00000507009 C20orf173Q96LM9 149 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 MGLLQ99685 303 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 SRSF8Q9BRL6 282 aaKnown RBP4.16□□□□□ -1.74
GYPB-208ENST00000507009 GINS3Q9BRX5 216 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 HRH4Q9H3N8 390 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 ACOT13Q9NPJ3 140 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 KLK9Q9UKQ9 250 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 TBC1D24Q9ULP9 559 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 PKD1P98161 4303 aa4.16□□□□□ -1.74
GYPB-208ENST00000507009 AGRNO00468 2067 aa4.15□□□□□ -1.74
GYPB-208ENST00000507009 IGHV3OR16-12A0A075B7B8 117 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 ERICH4A6NGS2 130 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 C16orf90A8MZG2 172 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 RGS10O43665 173 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 MT-CO2P00403 227 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 AMBPP02760 352 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 NPY1RP25929 384 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 LPAR6P43657 344 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 HERV-K104P61576 105 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 MLLT11Q13015 90 aaPredicted RBP4.15□□□□□ -1.75
GYPB-208ENST00000507009 IRF3Q14653 427 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 SSX1Q16384 188 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 SPINK9Q5DT21 86 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 SOHLH1Q5JUK2 328 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 FAM90A2PQ658T7 463 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 ZNF773Q6PK81 442 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 TOMM20LQ6UXN7 152 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 ZNF818PQ6ZRF7 136 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 TPRA1Q86W33 373 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 BEST4Q8NFU0 473 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 RNF141Q8WVD5 230 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 MOB3AQ96BX8 217 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 DGCR14Q96DF8 476 aaKnown RBP4.15□□□□□ -1.75
GYPB-208ENST00000507009 ZNF414Q96IQ9 312 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 TMEM56Q96MV1 263 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 NXF2Q9GZY0 626 aaKnown RBP4.15□□□□□ -1.75
GYPB-208ENST00000507009 DCSTAMPQ9H295 470 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 PLEKHA2Q9HB19 425 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 C8orf4Q9NR00 106 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 NDUFA4L2Q9NRX3 87 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 TMEM14BQ9NUH8 114 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 XCL2Q9UBD3 114 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 DAPK2Q9UIK4 370 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 TPRKBQ9Y3C4 175 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 PUS1Q9Y606 427 aaKnown RBP eCLIP4.15□□□□□ -1.75
GYPB-208ENST00000507009 X6R8D5 127 aa4.15□□□□□ -1.75
GYPB-208ENST00000507009 DNAH11Q96DT5 4516 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 TRAV18A0A075B6X5 111 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 TRAV1-2A0A0B4J238 106 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 MARCH11A6NNE9 402 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 RBFOX2O43251 390 aaKnown RBP eCLIP4.14□□□□□ -1.75
GYPB-208ENST00000507009 IGKV3-20P01619 116 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 GIG44P09565 113 aaPredicted RBP4.14□□□□□ -1.75
GYPB-208ENST00000507009 SPP1P10451 314 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 FXYD7P58549 80 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 POU2AF1Q16633 256 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 LGALS9BQ3B8N2 356 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 PSMG4Q5JS54 123 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 C1orf134Q5TEV5 83 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 THOC7Q6I9Y2 204 aaKnown RBP4.14□□□□□ -1.75
GYPB-208ENST00000507009 MORN3Q6PF18 240 aaPredicted RBP4.14□□□□□ -1.75
GYPB-208ENST00000507009 HSD17B13Q7Z5P4 300 aaPredicted RBP4.14□□□□□ -1.75
GYPB-208ENST00000507009 TRPT1Q86TN4 253 aaKnown RBP4.14□□□□□ -1.75
GYPB-208ENST00000507009 ZBTB34Q8NCN2 500 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 DUSP18Q8NEJ0 188 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 LGALS14Q8TCE9 139 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 FCAMRQ8WWV6 532 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 OR10C1Q96KK4 312 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 VCXQ9H320 206 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 COMMD9Q9P000 198 aa4.14□□□□□ -1.75
GYPB-208ENST00000507009 ZNF705EA8MWA4 302 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms