RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 PIGBOS1A0A0B4J2F0 54 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 F8W735 103 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-210ENST00000506941 I3L2K1 104 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 PITX3O75364 302 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 ADAP1O75689 374 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 PRB2P02812 416 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-210ENST00000506941 ARL3P36405 182 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 SYNJ2BPP57105 145 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 TNFRSF9Q07011 255 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 EGFEM1PQ0D2K5 195 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 FAM209BQ5JX69 171 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 C9orf66Q5T8R8 295 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 PVRIGQ6DKI7 326 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 ACSM6Q6P461 480 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 SCARB1Q8WTV0 552 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 MISP3Q96FF7 219 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 GPR61Q9BZJ8 451 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 ENY2Q9NPA8 101 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 TMED3Q9Y3Q3 217 aa13.9□□□□□ -0.18
NPHP4-210ENST00000506941 CEBPZOSA8MTT3 80 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 CLEC3BP05452 202 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 H2AFB2P0C5Z0 115 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 SLC25A6P12236 298 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 GPR183P32249 361 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 SNCAP37840 140 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 GGNBP1Q5YKI7 109 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 OR1S1Q8NH92 325 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 RBKSQ9H477 322 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 ZC4H2Q9NQZ6 224 aa13.89□□□□□ -0.19
NPHP4-210ENST00000506941 MPTX1A8MV57 137 aa13.88□□□□□ -0.19
NPHP4-210ENST00000506941 GGCTO75223 188 aaKnown RBP13.88□□□□□ -0.19
NPHP4-210ENST00000506941 OR2C1O95371 312 aa13.88□□□□□ -0.19
NPHP4-210ENST00000506941 IL34Q6ZMJ4 242 aa13.88□□□□□ -0.19
NPHP4-210ENST00000506941 COQ8AQ8NI60 647 aa13.88□□□□□ -0.19
NPHP4-210ENST00000506941 MITD1Q8WV92 249 aa13.88□□□□□ -0.19
NPHP4-210ENST00000506941 TMEM170AQ8WVE7 144 aa13.88□□□□□ -0.19
NPHP4-210ENST00000506941 SEC22CQ9BRL7 303 aa13.88□□□□□ -0.19
NPHP4-210ENST00000506941 HEYLQ9NQ87 328 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-210ENST00000506941 C21orf62Q9NYP8 219 aa13.88□□□□□ -0.19
NPHP4-210ENST00000506941 OR2T8A6NH00 312 aa13.87□□□□□ -0.19
NPHP4-210ENST00000506941 SAP30O75446 220 aa13.87□□□□□ -0.19
NPHP4-210ENST00000506941 MT-CO2P00403 227 aa13.87□□□□□ -0.19
NPHP4-210ENST00000506941 IGHV3-48P01763 117 aa13.87□□□□□ -0.19
NPHP4-210ENST00000506941 NRARPQ7Z6K4 114 aa13.87□□□□□ -0.19
NPHP4-210ENST00000506941 OR9G4Q8NGQ1 327 aa13.87□□□□□ -0.19
NPHP4-210ENST00000506941 ENKURQ8TC29 256 aa13.87□□□□□ -0.19
NPHP4-210ENST00000506941 PINX1Q96BK5 328 aaKnown RBP13.87□□□□□ -0.19
NPHP4-210ENST00000506941 CACFD1Q9UGQ2 172 aa13.87□□□□□ -0.19
NPHP4-210ENST00000506941 TGOLN2O43493 480 aa13.86□□□□□ -0.19
NPHP4-210ENST00000506941 SUB1P53999 127 aaKnown RBP eCLIP13.86□□□□□ -0.19
NPHP4-210ENST00000506941 DTD1Q8TEA8 209 aa13.86□□□□□ -0.19
NPHP4-210ENST00000506941 CHRDL1Q9BU40 450 aa13.86□□□□□ -0.19
NPHP4-210ENST00000506941 AURKAIP1Q9NWT8 199 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-210ENST00000506941 ADMP35318 185 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 HTR2BP41595 481 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 INSL3P51460 131 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 C2orf83Q53S99 150 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 HAPLN4Q86UW8 402 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 GPHB5Q86YW7 130 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 UBAC2Q8NBM4 344 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 DUSP18Q8NEJ0 188 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 SLC24A4Q8NFF2 622 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 BSCL2Q96G97 398 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-210ENST00000506941 ZNF414Q96IQ9 312 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
NPHP4-210ENST00000506941 FNDC4Q9H6D8 234 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-210ENST00000506941 IGHV3-35A0A0C4DH35 117 aa13.84□□□□□ -0.19
NPHP4-210ENST00000506941 FAM90A26D6RGX4 464 aa13.84□□□□□ -0.19
NPHP4-210ENST00000506941 CSN3P07498 182 aa13.84□□□□□ -0.19
NPHP4-210ENST00000506941 EDN2P20800 178 aa13.84□□□□□ -0.19
NPHP4-210ENST00000506941 FCGR2BP31994 310 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-210ENST00000506941 Q56UQ5 140 aa13.84□□□□□ -0.19
NPHP4-210ENST00000506941 PLET1Q6UQ28 207 aa13.84□□□□□ -0.19
NPHP4-210ENST00000506941 ZNF431Q8TF32 576 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-210ENST00000506941 ELOVL1Q9BW60 279 aa13.84□□□□□ -0.19
NPHP4-210ENST00000506941 HIPK2Q9H2X6 1198 aa13.84□□□□□ -0.19
NPHP4-210ENST00000506941 MRPL36Q9P0J6 103 aaKnown RBP13.84□□□□□ -0.19
NPHP4-210ENST00000506941 LGALS9O00182 355 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 CORTO00230 105 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 CTSGP08311 255 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 MFAP4P55083 255 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 MLANAQ16655 118 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 TATDN3Q17R31 274 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 UNQ9165/PRO28630Q6UXU0 137 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 ADAMTSL5Q6ZMM2 481 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 REC114Q7Z4M0 266 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 OR10C1Q96KK4 312 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 OR4C12Q96R67 309 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 MAGT1Q9H0U3 335 aa13.83□□□□□ -0.2
NPHP4-210ENST00000506941 CCSO14618 274 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 IFNA21P01568 189 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 IAPPP10997 89 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 NPY1RP25929 384 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 OPRK1P41145 380 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 DEFA1P59665 94 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 DEFA3P59666 94 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 SPSB3Q6PJ21 355 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 OR4D5Q8NGN0 318 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 TXN2Q99757 166 aa13.82□□□□□ -0.2
NPHP4-210ENST00000506941 ZNF436Q9C0F3 470 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms