RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 CDK10Q15131 360 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 ELOBQ15370 118 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 KCNJ8Q15842 424 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 TMEM155Q4W5P6 130 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 FAM27BQ5VT28 67 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 OOSP2Q86WS3 158 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 COA5Q86WW8 74 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 DHFR2Q86XF0 187 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 OR8B3Q8NGG8 313 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 SPACA4Q8TDM5 124 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 CT55Q8WUE5 264 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 TMEM106AQ96A25 262 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 PRAP1Q96NZ9 151 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 SCGB3A1Q96QR1 104 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 HSPB9Q9BQS6 159 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 NAA38Q9BRA0 125 aaKnown RBP0.76□□□□□ -2.29
GYPB-207ENST00000506679 TMEM147Q9BVK8 224 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 CCDC90BQ9GZT6 254 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 TLNRD1Q9H1K6 362 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 CMTM6Q9NX76 183 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 PKIGQ9Y2B9 76 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 PCDH15Q96QU1 1955 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 TOPBP1Q92547 1522 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 NEO1Q92859 1461 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 RGS12O14924 1447 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 PIK3C2GO75747 1445 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 A0A0D9SG52 128 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 hADV38S2A0JD32 116 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 FUOMA2VDF0 154 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 TRAPPC13A5PLN9 417 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 ORC5O43913 435 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 PDE6DO43924 150 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 CNIH1O95406 144 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 TCL1BO95988 128 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 IGKV1-5P01602 117 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 IFNA6P05013 189 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 RPSAP08865 295 aaKnown RBP0.75□□□□□ -2.29
GYPB-207ENST00000506679 HTR1AP08908 422 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 SMIM10L2AP0DMW4 78 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 SMIM10L2BP0DMW5 78 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 G6PCP35575 357 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 AQP4P55087 323 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 KRTAP10-4P60372 401 aaPredicted RBP0.75□□□□□ -2.29
GYPB-207ENST00000506679 ERVS71-1P61550 626 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 MIR17HGQ75NE6 70 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 AAED1Q7RTV5 226 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 DEFB128Q7Z7B8 93 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 KRT222Q8N1A0 295 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 GDPD1Q8N9F7 314 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 OR5B17Q8NGF7 314 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 OR4D11Q8NGI4 311 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 KLK6Q92876 244 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 C2orf50Q96LR7 162 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 KIFC1Q9BW19 673 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 YIPF3Q9GZM5 350 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 CYSTM1Q9H1C7 97 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 MIXL1Q9H2W2 232 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 NMNAT1Q9HAN9 279 aaPredicted RBP0.75□□□□□ -2.29
GYPB-207ENST00000506679 SLC39A9Q9NUM3 307 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 CKLFQ9UBR5 152 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 BAIAP2Q9UQB8 552 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 ARL2BPQ9Y2Y0 163 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 PRELID3BQ9Y3B1 194 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 CCDC88AQ3V6T2 1871 aa0.75□□□□□ -2.29
GYPB-207ENST00000506679 RIC1Q4ADV7 1423 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
GYPB-207ENST00000506679 ECM29Q5VYK3 1845 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 TRAPPC2LH3BP13 241 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 ATP5HO75947 161 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 OR2B3O76000 313 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 OR7C1O76099 320 aaPredicted RBP0.74□□□□□ -2.29
GYPB-207ENST00000506679 PMP2P02689 132 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 CRPP02741 224 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 SERPINE1P05121 402 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 C8GP07360 202 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 ZNF705BP0CI00 300 aaPredicted RBP0.74□□□□□ -2.29
GYPB-207ENST00000506679 COX6A1P12074 109 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 DEFA4P12838 97 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 GPX2P18283 190 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 PPIBP23284 216 aaKnown RBP0.74□□□□□ -2.29
GYPB-207ENST00000506679 S100A4P26447 101 aaKnown RBP0.74□□□□□ -2.29
GYPB-207ENST00000506679 HOXA6P31267 233 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 MAGEA12P43365 314 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 EIF2B2P49770 351 aaKnown RBP0.74□□□□□ -2.29
GYPB-207ENST00000506679 RPS20P60866 119 aaKnown RBP0.74□□□□□ -2.29
GYPB-207ENST00000506679 YPEL3P61236 119 aaPredicted RBP0.74□□□□□ -2.29
GYPB-207ENST00000506679 SUPT4H1P63272 117 aaKnown RBP0.74□□□□□ -2.29
GYPB-207ENST00000506679 ZNF345Q14585 488 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 TMED2Q15363 201 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 MOGQ16653 247 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 Q1T7F1 81 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 ARHGAP11BQ3KRB8 267 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 LIN52Q52LA3 116 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 SPANXN5Q5MJ07 72 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 DPPA3Q6W0C5 159 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 C7orf65Q6ZTY9 151 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 TRAPPC6BQ86SZ2 158 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 LINC00471Q8N535 108 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 ZNF439Q8NDP4 499 aa0.74□□□□□ -2.29
GYPB-207ENST00000506679 WFDC11Q8NEX6 87 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms