RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ZNF436Q9C0F3 470 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR51B6Q9H340 312 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR51I1Q9H343 314 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 METTL17Q9H7H0 456 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 LINC00574Q9H8X3 128 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 UBQLN4Q9NRR5 601 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 CBLN4Q9NTU7 201 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 FAIMQ9NVQ4 179 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 TMEM38BQ9NVV0 291 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 PAQR5Q9NXK6 330 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 DNAJC15Q9Y5T4 150 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 CADP27708 2225 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 EML6Q6ZMW3 1958 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 EXPH5Q8NEV8 1989 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 MPDZO75970 2070 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 NINQ8N4C6 2090 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGLV2-18A0A075B6J9 118 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 A0A1W2PQD3 144 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 IZUMO1RA6ND01 250 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF98A6NK75 572 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 F5H5K5 113 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 K7EPK0 472 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 COPEO14579 308 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 GPR171O14626 319 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 TCF21O43680 179 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 MRPL33O75394 65 aaKnown RBP1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 CDRT1O95170 752 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 CPSF4O95639 269 aaKnown RBP1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 ORM1P02763 201 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGLV7-43P04211 117 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR4A8P0C604 315 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR12D1P0DN82 309 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 NEFHP12036 1026 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 HLA-DMAP28067 261 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 RCVRNP35243 200 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 CDKN2CP42773 168 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 IDH3GP51553 393 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 KRTAP12-2P59991 146 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 HBA1P69905 142 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 HPCAP84074 193 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 GLO1Q04760 184 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 MOBPQ13875 183 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 LCE3AQ5TA76 89 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 TMPPEQ6ZT21 453 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 GRINAQ7Z429 371 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 GATD1Q8NB37 220 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 SUN5Q8TC36 379 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 KLF14Q8TD94 323 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 YIPF5Q969M3 257 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 ROPN1LQ96C74 230 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 FXYD5Q96DB9 178 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 STACQ99469 402 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 SDF2Q99470 211 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF426Q9BUY5 554 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 DYNLRB1Q9NP97 96 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 INIPQ9NRY2 104 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 NKIRAS1Q9NYS0 192 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 TAS2R7Q9NYW3 318 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 EMC3Q9P0I2 261 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 NOTCH1P46531 2555 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 CR1P17927 2039 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 PLCE1Q9P212 2302 aa1.88□□□□□ -2.11
TRAPPC11-205ENST00000506426 CMYA5Q8N3K9 4069 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 MED12LQ86YW9 2145 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 TMED7-TICAM2A0A0A6YYA0 188 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 A0A0A6YYH2 397 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 A6NJ64 397 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 TMEM114B3SHH9 223 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 FTCDNL1E5RQL4 147 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 LRRN3E7EW58 273 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 HMGN4O00479 90 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 DSCAMO60469 2012 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 TGP01266 2768 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 GTF2F2P13984 249 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 ALDH3A1P30838 453 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 TGFBR1P36897 503 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 PMELP40967 661 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 HSPA13P48723 471 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 DNAJB13P59910 316 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 ERVS71-1P61550 626 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 CHD3Q12873 2000 aaKnown RBP1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF141Q15928 474 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 WHAMMP3Q1A5X7 153 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 TMEM241Q24JQ0 296 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 TTC33Q6PID6 262 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 AAED1Q7RTV5 226 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 MTERF4Q7Z6M4 381 aaKnown RBP1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 DAZ4Q86SG3 579 aaKnown RBP1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 ALPK2Q86TB3 2170 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 LRP11Q86VZ4 500 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 C3orf56Q8N813 242 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZIC4Q8N9L1 334 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR4P4Q8NGL7 312 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR9I1Q8NGQ6 314 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 CLDND2Q8NHS1 167 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 PIGXQ8TBF5 258 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZHX1-C8orf76Q96EF9 292 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 TEX37Q96LM6 180 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 PPP3R2Q96LZ3 170 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 TSPAN32Q96QS1 320 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms