RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 GGTLC3B5MD39 225 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 CORTO00230 105 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 SMPD2O60906 423 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 RFPL3SP0C7P2 107 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 C8orf88P0DMB2 117 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
SCLT1-208ENST00000506368 HSPE1P61604 102 aaKnown RBP13.06□□□□□ -0.32
SCLT1-208ENST00000506368 AMMECR1LQ6DCA0 310 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 NUP35Q8NFH5 326 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 SCRT2Q9NQ03 307 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 TMEM140Q9NV12 185 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 DUSP13Q9UII6 198 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 A0A0G2JMM0 328 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-208ENST00000506368 A0A1W2PPB8 328 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 OR2T8A6NH00 312 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 KIR3DP1A8MWS1 328 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 NDUFS8O00217 210 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 MT-CO3P00414 261 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 LIPFP07098 398 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 NBEAP1P0C6P0 100 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 CA7P43166 264 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 C9orf135Q5VTT2 229 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 FAM214BQ7L5A3 538 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 TUSC5Q8IXB3 177 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 OR4S2Q8NH73 311 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 COQ2Q96H96 371 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 S1PR3Q99500 378 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 AKIRIN1Q9H9L7 192 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-208ENST00000506368 RNF24Q9Y225 148 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 PTPRBP23467 1997 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 AKAP13Q12802 2813 aa13.05□□□□□ -0.32
SCLT1-208ENST00000506368 IQCF6A8MYZ5 107 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 OR7C2O60412 319 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 LEPROTL1O95214 131 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 IGLC1P0CG04 106 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 IGFBP2P18065 325 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 PSG9Q00887 426 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 AESQ08117 197 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 GCM1Q9NP62 436 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 FRYQ5TBA9 3013 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 KNTC1P50748 2209 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 A0A1B0GXF2 115 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
SCLT1-208ENST00000506368 TMEM11P17152 192 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 CEACAM3P40198 252 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 FOLR3P41439 243 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 CT83Q5H943 113 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 OR2T6Q8NHC8 308 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 DPF1Q92782 380 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 ZNF503Q96F45 646 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 MAP1LC3CQ9BXW4 147 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 B4GALT7Q9UBV7 327 aa13.04□□□□□ -0.32
SCLT1-208ENST00000506368 ZNF407Q9C0G0 2248 aa13.03□□□□□ -0.32
SCLT1-208ENST00000506368 MUC21A0A0G2JKD1 596 aa13.03□□□□□ -0.32
SCLT1-208ENST00000506368 MUC21A0A140T8X8 626 aa13.03□□□□□ -0.32
SCLT1-208ENST00000506368 MUC21Q5SSG8 566 aa13.03□□□□□ -0.32
SCLT1-208ENST00000506368 FAM120AOSQ5T036 256 aa13.03□□□□□ -0.32
SCLT1-208ENST00000506368 TMEM14BQ9NUH8 114 aa13.03□□□□□ -0.32
SCLT1-208ENST00000506368 CLCF1Q9UBD9 225 aa13.03□□□□□ -0.32
SCLT1-208ENST00000506368 HSPB8Q9UJY1 196 aa13.03□□□□□ -0.32
SCLT1-208ENST00000506368 C15orf65H3BRN8 121 aa13.03□□□□□ -0.32
SCLT1-208ENST00000506368 RPL8P62917 257 aaKnown RBP13.03□□□□□ -0.32
SCLT1-208ENST00000506368 CYB561P49447 251 aa13.02□□□□□ -0.33
SCLT1-208ENST00000506368 HBBP68871 147 aa13.02□□□□□ -0.33
SCLT1-208ENST00000506368 HES3Q5TGS1 186 aa13.02□□□□□ -0.33
SCLT1-208ENST00000506368 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.02□□□□□ -0.33
SCLT1-208ENST00000506368 SLC25A33Q9BSK2 321 aa13.02□□□□□ -0.33
SCLT1-208ENST00000506368 RAB9BQ9NP90 201 aa13.02□□□□□ -0.33
SCLT1-208ENST00000506368 ZNF257Q9Y2Q1 563 aa13.02□□□□□ -0.33
SCLT1-208ENST00000506368 NCKAP5O14513 1909 aa13.02□□□□□ -0.33
SCLT1-208ENST00000506368 ACTL6BO94805 426 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 OTX2P32243 289 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 FOXG1P55316 489 aaPredicted RBP13.01□□□□□ -0.33
SCLT1-208ENST00000506368 POU2AF1Q16633 256 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 ACP7Q6ZNF0 438 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 Q8TCH9 128 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 SNRNP40Q96DI7 357 aaKnown RBP13.01□□□□□ -0.33
SCLT1-208ENST00000506368 MEGF9Q9H1U4 602 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 IDI2-AS1Q9NZ38 188 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 GAGE10A6NGK3 116 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 GPR183P32249 361 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 SMIM21Q3B7S5 101 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 GDF5OSQ5U4N7 250 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 OR13A1Q8NGR1 328 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 ADTRPQ96IZ2 230 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 ZNF355PQ9NSJ1 428 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 PRNDQ9UKY0 176 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 ESPL1Q14674 2120 aa13.01□□□□□ -0.33
SCLT1-208ENST00000506368 IGHV1-24A0A0C4DH33 117 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 PAX2Q02962 417 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 CR1LQ2VPA4 569 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 FAM90A1Q86YD7 464 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 DDB2Q92466 427 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 GFRA4Q9GZZ7 299 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 AMMECR1Q9Y4X0 333 aaPredicted RBP13□□□□□ -0.33
SCLT1-208ENST00000506368 FAM231BA6NCW3 169 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 HIGD1CA8MV81 97 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 C3orf80F5H4A9 247 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 PROP1O75360 226 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms