RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 OR1S1Q8NH92 325 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 DPF1Q92782 380 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 WDR89Q96FK6 387 aaPredicted RBP5.7□□□□□ -1.5
NUP54-204ENST00000506098 JMJD8Q96S16 334 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 SRSF8Q9BRL6 282 aaKnown RBP5.7□□□□□ -1.5
NUP54-204ENST00000506098 QTRT1Q9BXR0 403 aaKnown RBP5.7□□□□□ -1.5
NUP54-204ENST00000506098 NDUFA4L2Q9NRX3 87 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 ZFP57Q9NU63 452 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 ZNF580Q9UK33 172 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 NSG2Q9Y328 171 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 HSPB11Q9Y547 144 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 OR51B2Q9Y5P1 312 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 C2CD3Q4AC94 2353 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 A0A1B0GW64 132 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 TMEM238C9JI98 176 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 E7EUB6 86 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 G3V3Q6 166 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 K7EPK0 472 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 SYNGR2O43760 224 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 GPR137BO60478 399 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 MPC2O95563 127 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 LY86O95711 162 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 IFNA17P01571 189 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 EGR2P11161 476 aaPredicted RBP5.69□□□□□ -1.5
NUP54-204ENST00000506098 LYL1P12980 280 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 DDTP30046 118 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 RPL27AP46776 148 aaKnown RBP5.69□□□□□ -1.5
NUP54-204ENST00000506098 RAB5CP51148 216 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 RBX1P62877 108 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 CX3CL1P78423 397 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 RAB32Q13637 225 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 FXYD3Q14802 87 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 TNXAQ16473 311 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 UQCC3Q6UW78 93 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 Q8N2B8 174 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 SGMS2Q8NHU3 365 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 PPP1R1CQ8WVI7 109 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 SRSF12Q8WXF0 261 aaKnown RBP5.69□□□□□ -1.5
NUP54-204ENST00000506098 CLCC1Q96S66 551 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 HSPB9Q9BQS6 159 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 NKX6-2Q9C056 277 aaPredicted RBP5.69□□□□□ -1.5
NUP54-204ENST00000506098 COMMD5Q9GZQ3 224 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 C11orf1Q9H5F2 150 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 RANGRFQ9HD47 186 aaPredicted RBP5.69□□□□□ -1.5
NUP54-204ENST00000506098 GSKIPQ9P0R6 139 aa5.69□□□□□ -1.5
NUP54-204ENST00000506098 NIPBLQ6KC79 2804 aaeCLIP5.69□□□□□ -1.5
NUP54-204ENST00000506098 TRAV14DV4A0A0A6YYC5 116 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 IGLC7A0M8Q6 106 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 TEX22C9J3V5 150 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 H0YIZ8 118 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 TEX46H3BTG2 121 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 K7EP13 123 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 TCF21O43680 179 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 RBMXL2O75526 392 aaKnown RBP5.68□□□□□ -1.5
NUP54-204ENST00000506098 DEDDO75618 318 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 ACTL6BO94805 426 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 IGF1P05019 195 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 SLC25A4P12235 298 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 MYOD1P15172 320 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 HIST1H1BP16401 226 aaKnown RBP5.68□□□□□ -1.5
NUP54-204ENST00000506098 PVALBP20472 110 aaPredicted RBP5.68□□□□□ -1.5
NUP54-204ENST00000506098 VDAC2P45880 294 aaPredicted RBP5.68□□□□□ -1.5
NUP54-204ENST00000506098 PAX9P55771 341 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 TAS2R30P59541 319 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 BLCAPP62952 87 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 UBA52P62987 128 aaKnown RBP5.68□□□□□ -1.5
NUP54-204ENST00000506098 NDPQ00604 133 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 KLK9Q2XQG4 91 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 BSXQ3C1V8 233 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 AKIRIN2Q53H80 203 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 C19orf54Q5BKX5 351 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 SLC16A13Q7RTY0 426 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 ARPC1AQ92747 370 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 SMIM8Q96KF7 97 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 LINC00052Q96N35 136 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 CIB3Q96Q77 187 aaPredicted RBP5.68□□□□□ -1.5
NUP54-204ENST00000506098 RAB40CQ96S21 281 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 RNF126Q9BV68 326 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 PRSS22Q9GZN4 317 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 NPFFR1Q9GZQ6 430 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 RBKSQ9H477 322 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 ZNF702PQ9H963 129 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 KLK9Q9UKQ9 250 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 RPH3ALQ9UNE2 315 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 RCL1Q9Y2P8 373 aaKnown RBP5.68□□□□□ -1.5
NUP54-204ENST00000506098 FBXO7Q9Y3I1 522 aa5.68□□□□□ -1.5
NUP54-204ENST00000506098 FAM181BA6NEQ2 426 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 MSGN1A6NI15 193 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 LINC01548A6NM66 108 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 ATP6V0E1O15342 81 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 CNIH1O95406 144 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 PET100P0DJ07 73 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 ATP5IP56385 69 aaPredicted RBP5.67□□□□□ -1.5
NUP54-204ENST00000506098 EXOSC2Q13868 293 aaKnown RBP5.67□□□□□ -1.5
NUP54-204ENST00000506098 C10orf55Q5SWW7 151 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 ASPHD1Q5U4P2 390 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 PVRIGQ6DKI7 326 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 C11orf87Q6NUJ2 197 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 PRSS54Q6PEW0 395 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 Q6ZS46 218 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms