RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SFXN4Q6P4A7 337 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 LCN15Q6UWW0 184 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 ZNF826PQ6ZT77 177 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 MIR17HGQ75NE6 70 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 PHF13Q86YI8 300 aaPredicted RBP0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 C20orf196Q8IYI0 205 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 C1orf158Q8N1D5 194 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 ZNF439Q8NDP4 499 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR4E2Q8NGC2 313 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR13C4Q8NGS5 318 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 AQP3Q92482 292 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 PTH2Q96A98 100 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 DERL1Q9BUN8 251 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 MIXL1Q9H2W2 232 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 XPNPEP1Q9NQW7 623 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 DENND4CQ5VZ89 1909 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 CEP192Q8TEP8 1941 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 ZFC3H1O60293 1989 aaKnown RBP0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 DOCK5Q9H7D0 1870 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 LAMA4Q16363 1823 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 TGOLN2O43493 480 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 HYPMO75409 117 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 AHSA1O95433 338 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 TCL1BO95988 128 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 IFNA5P01569 189 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 HLA-DRB1P01911 266 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 CLPSP04118 112 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 ASAH2BP0C7U1 165 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST1H1EP10412 219 aaKnown RBP0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 RNASE3P12724 160 aaKnown RBP0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 SULT1A1P50225 295 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 SNRPD2P62316 118 aaKnown RBP0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 HBA1P69905 142 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR2F1Q13607 317 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 SPOPLQ6IQ16 392 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 TRAPPC6BQ86SZ2 158 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 FAM19A2Q8N3H0 131 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 C15orf53Q8NAA6 179 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR51D1Q8NGF3 324 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR2T4Q8NH00 348 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 PFN4Q8NHR9 129 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 DDI1Q8WTU0 396 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 DNAJC9Q8WXX5 260 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 SLC35B4Q969S0 331 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 TOMM6Q96B49 74 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 LINC00526Q96FQ7 95 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 IMP4Q96G21 291 aaKnown RBP0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 DCUN1D1Q96GG9 259 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 SLC50A1Q9BRV3 221 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 ULBP3Q9BZM4 244 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 CISHQ9NSE2 258 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 SLC39A9Q9NUM3 307 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 NHP2Q9NX24 153 aaKnown RBP0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 FBXL12Q9NXK8 326 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 KLK9Q9UKQ9 250 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 GUCA1BQ9UMX6 200 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 TMEM56-RWDD3S4R434 201 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 TOPBP1Q92547 1522 aa0.37□□□□□ -2.35
HMGB1P29-201ENST00000505659 SNAPC4Q5SXM2 1469 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 NUP155O75694 1391 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 MCM3APO60318 1980 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 TRAV9-1A0A075B6T8 112 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 TRBV6-7A0A0A0MS04 114 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 EXOC1LA0A1B0GW35 172 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 PQLC2LA1A4F0 135 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 DPRXA6NFQ7 191 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 FADS1O60427 444 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR1I1O60431 355 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 PROSCO94903 275 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 CRYZL1O95825 349 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 IGKV1-5P01602 117 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 BAALC-AS2P0C853 105 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 S100A4P26447 101 aaKnown RBP0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 FKBP2P26885 142 aaKnown RBP0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 NKX2-5P52952 324 aaPredicted RBP0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 CEBPGP53567 150 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 RAB4BP61018 213 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 RHOGP84095 191 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 RHEBQ15382 184 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 KCNJ8Q15842 424 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 CDKL4Q5MAI5 379 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 C8orf74Q6P047 294 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 OOSP2Q86WS3 158 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 BPIFA4PQ86YQ2 179 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 CLVS1Q8IUQ0 354 aaPredicted RBP0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 KRT222Q8N1A0 295 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST3H2BBQ8N257 126 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 LINC00311Q8N616 119 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 ANKRD29Q8N6D5 301 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR5A1Q8NGJ0 315 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 NIPSNAP1Q9BPW8 284 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 CMSS1Q9BQ75 279 aaKnown RBP0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 TMEM147Q9BVK8 224 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 TAS2R4Q9NYW5 299 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 C22orf24Q9Y442 160 aa0.36□□□□□ -2.35
HMGB1P29-201ENST00000505659 IGKV1D-42A0A075B6H8 117 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 LOC110117498A0A087WWA1 95 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 CLDN25C9JDP6 229 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms