RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 K7EIM0 57 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 CYB5BO43169 146 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 PITX3O75364 302 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 ADAP1O75689 374 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 H2AFB2P0C5Z0 115 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 BSXQ3C1V8 233 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 GGNBP1Q5YKI7 109 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 NRARPQ7Z6K4 114 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 OR1L6Q8NGR2 347 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 COQ8AQ8NI60 647 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 ZNF502Q8TBZ5 544 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 ENKURQ8TC29 256 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 EEF1AKMT3Q96AZ1 226 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 CXorf58Q96LI9 332 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 MCRIP2Q9BUT9 160 aaKnown RBP12.91□□□□□ -0.34
SYNE4-207ENST00000505054 THYN1Q9P016 225 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
SYNE4-207ENST00000505054 IGHV3-21A0A0B4J1V1 117 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 PPP5D1E7EU14 171 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 RNASE2P10153 161 aaKnown RBP12.9□□□□□ -0.34
SYNE4-207ENST00000505054 SLC25A6P12236 298 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 ZP3P21754 424 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 TNFRSF9Q07011 255 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 PVRIGQ6DKI7 326 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 CLEC19AQ6UXS0 136 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 OR1S1Q8NH92 325 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 VN1R17PQ8TDU5 208 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 MITD1Q8WV92 249 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 SEC22CQ9BRL7 303 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 ENY2Q9NPA8 101 aa12.9□□□□□ -0.34
SYNE4-207ENST00000505054 TRBV7-1A0A0A6YYK4 115 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 CEBPZOSA8MTT3 80 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 I3L2K1 104 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 OVOL1O14753 267 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 SNCAP37840 140 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 KLF5Q13887 457 aaPredicted RBP12.89□□□□□ -0.35
SYNE4-207ENST00000505054 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 DUSP18Q8NEJ0 188 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 SCARB1Q8WTV0 552 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 MISP3Q96FF7 219 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
SYNE4-207ENST00000505054 CACFD1Q9UGQ2 172 aa12.89□□□□□ -0.35
SYNE4-207ENST00000505054 MPTX1A8MV57 137 aa12.88□□□□□ -0.35
SYNE4-207ENST00000505054 SEC14L6B5MCN3 397 aa12.88□□□□□ -0.35
SYNE4-207ENST00000505054 F8W735 103 aaPredicted RBP12.88□□□□□ -0.35
SYNE4-207ENST00000505054 DEFA1P59665 94 aa12.88□□□□□ -0.35
SYNE4-207ENST00000505054 DEFA3P59666 94 aa12.88□□□□□ -0.35
SYNE4-207ENST00000505054 ZNF431Q8TF32 576 aaPredicted RBP12.88□□□□□ -0.35
SYNE4-207ENST00000505054 RBKSQ9H477 322 aa12.88□□□□□ -0.35
SYNE4-207ENST00000505054 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
SYNE4-207ENST00000505054 MT-CO2P00403 227 aa12.87□□□□□ -0.35
SYNE4-207ENST00000505054 NHLRC4P0CG21 123 aaPredicted RBP12.87□□□□□ -0.35
SYNE4-207ENST00000505054 GPR183P32249 361 aa12.87□□□□□ -0.35
SYNE4-207ENST00000505054 ARL3P36405 182 aa12.87□□□□□ -0.35
SYNE4-207ENST00000505054 SYNJ2BPP57105 145 aa12.87□□□□□ -0.35
SYNE4-207ENST00000505054 RPEL1Q2QD12 228 aa12.87□□□□□ -0.35
SYNE4-207ENST00000505054 DTD1Q8TEA8 209 aa12.87□□□□□ -0.35
SYNE4-207ENST00000505054 TMEM170AQ8WVE7 144 aa12.87□□□□□ -0.35
SYNE4-207ENST00000505054 C21orf62Q9NYP8 219 aa12.87□□□□□ -0.35
SYNE4-207ENST00000505054 GGCTO75223 188 aaKnown RBP12.86□□□□□ -0.35
SYNE4-207ENST00000505054 IGHV3-48P01763 117 aa12.86□□□□□ -0.35
SYNE4-207ENST00000505054 CLEC3BP05452 202 aa12.86□□□□□ -0.35
SYNE4-207ENST00000505054 HTR2BP41595 481 aa12.86□□□□□ -0.35
SYNE4-207ENST00000505054 SUB1P53999 127 aaKnown RBP eCLIP12.86□□□□□ -0.35
SYNE4-207ENST00000505054 SLC24A4Q8NFF2 622 aa12.86□□□□□ -0.35
SYNE4-207ENST00000505054 PINX1Q96BK5 328 aaKnown RBP12.86□□□□□ -0.35
SYNE4-207ENST00000505054 ZC4H2Q9NQZ6 224 aa12.86□□□□□ -0.35
SYNE4-207ENST00000505054 U3KQK5 164 aa12.86□□□□□ -0.35
SYNE4-207ENST00000505054 FAM90A26D6RGX4 464 aa12.85□□□□□ -0.35
SYNE4-207ENST00000505054 TGOLN2O43493 480 aa12.85□□□□□ -0.35
SYNE4-207ENST00000505054 OR2C1O95371 312 aa12.85□□□□□ -0.35
SYNE4-207ENST00000505054 IFNA21P01568 189 aa12.85□□□□□ -0.35
SYNE4-207ENST00000505054 IL5P05113 134 aa12.85□□□□□ -0.35
SYNE4-207ENST00000505054 C2orf83Q53S99 150 aa12.85□□□□□ -0.35
SYNE4-207ENST00000505054 C9orf66Q5T8R8 295 aa12.85□□□□□ -0.35
SYNE4-207ENST00000505054 ACSM6Q6P461 480 aa12.85□□□□□ -0.35
SYNE4-207ENST00000505054 ATP6V0BQ99437 205 aa12.85□□□□□ -0.35
SYNE4-207ENST00000505054 OR2T8A6NH00 312 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 CCSO14618 274 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 SPNP16150 400 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 FCGR2BP31994 310 aaPredicted RBP12.84□□□□□ -0.35
SYNE4-207ENST00000505054 ADMP35318 185 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 PLET1Q6UQ28 207 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 IL34Q6ZMJ4 242 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 C12orf45Q8N5I9 185 aaPredicted RBP12.84□□□□□ -0.35
SYNE4-207ENST00000505054 UBAC2Q8NBM4 344 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 OR4D5Q8NGN0 318 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 OR9G4Q8NGQ1 327 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 OR10C1Q96KK4 312 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 MARVELD1Q9BSK0 173 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 CHRDL1Q9BU40 450 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 MAGT1Q9H0U3 335 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 HIPK2Q9H2X6 1198 aa12.84□□□□□ -0.35
SYNE4-207ENST00000505054 FNDC4Q9H6D8 234 aaPredicted RBP12.84□□□□□ -0.35
SYNE4-207ENST00000505054 INMT-MINDY4F8WBC2 141 aa12.83□□□□□ -0.36
SYNE4-207ENST00000505054 CORTO00230 105 aa12.83□□□□□ -0.36
SYNE4-207ENST00000505054 SAP30O75446 220 aa12.83□□□□□ -0.36
SYNE4-207ENST00000505054 IAPPP10997 89 aa12.83□□□□□ -0.36
SYNE4-207ENST00000505054 NPY1RP25929 384 aa12.83□□□□□ -0.36
SYNE4-207ENST00000505054 IAH1Q2TAA2 248 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms