RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 LIME1Q9H400 295 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 TMEM9BQ9NQ34 198 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 KCNIP2Q9NS61 270 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 RPRMQ9NS64 109 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 TCF19Q9Y242 345 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 EP300Q09472 2414 aaPredicted RBP3.35□□□□□ -1.87
RFC1-208ENST00000504849 CEP250Q9BV73 2442 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 SCN2AQ99250 2005 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 MYOFQ9NZM1 2061 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 IGLV3-12A0A075B6K2 115 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 TRBV9A0A0B4J1U6 114 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 IGKV1-12A0A0C4DH73 117 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 TRBV7-9A0A0J9YWB2 115 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 UBE2L5PA0A1B0GUS4 154 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 FAM166BA8MTA8 275 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 C10orf142B7Z368 130 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 H3BP45 60 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 TNFSF11O14788 317 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 EFNA2O43921 213 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 TNFSF13O75888 250 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 MMP23AO75900 390 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 TMEM50AO95807 157 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 NAPSAO96009 420 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 MT-CO2P00403 227 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 CA1P00915 261 aaPredicted RBP3.34□□□□□ -1.87
RFC1-208ENST00000504849 KRASP01116 189 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 IGKV1D-12P01611 117 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 SP1P08047 785 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 OR4A8P0C604 315 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 IAPPP10997 89 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 KITLGP21583 273 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 RPL29P47914 159 aaKnown RBP3.34□□□□□ -1.87
RFC1-208ENST00000504849 FGF8P55075 233 aaPredicted RBP3.34□□□□□ -1.87
RFC1-208ENST00000504849 PAX9P55771 341 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 ZFP36L1Q07352 338 aaKnown RBP3.34□□□□□ -1.87
RFC1-208ENST00000504849 CATR1Q13166 79 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 FAM78BQ5VT40 261 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 TOMM20LQ6UXN7 152 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 MRPL21Q7Z2W9 205 aaKnown RBP3.34□□□□□ -1.87
RFC1-208ENST00000504849 OR10G3Q8NGC4 313 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 OR10P1Q8NGE3 313 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 OR4B1Q8NGF8 309 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 OR10V1Q8NGI7 309 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 OR10G9Q8NGN4 311 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 OR10G7Q8NGN6 311 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 OR51H1Q8NH63 302 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 PSMF1Q92530 271 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 NAT6Q93015 286 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 CLDN23Q96B33 292 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 WFIKKN1Q96NZ8 548 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 TBX15Q96SF7 602 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 RSG1Q9BU20 258 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 SAMD10Q9BYL1 202 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 ZDHHC11Q9H8X9 412 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 CCL28Q9NRJ3 127 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 CBLN4Q9NTU7 201 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 TMEM38BQ9NVV0 291 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 ZNF586Q9NXT0 402 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 SIGLEC8Q9NYZ4 499 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 TAAR3PQ9P1P4 343 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 CACNG5Q9UF02 275 aa3.34□□□□□ -1.87
RFC1-208ENST00000504849 RBM7Q9Y580 266 aaKnown RBP3.34□□□□□ -1.87
RFC1-208ENST00000504849 TRPM6Q9BX84 2022 aa3.34□□□□□ -1.88
RFC1-208ENST00000504849 PIEZO2Q9H5I5 2752 aa3.34□□□□□ -1.88
RFC1-208ENST00000504849 TECTAO75443 2155 aa3.34□□□□□ -1.88
RFC1-208ENST00000504849 FRYLO94915 3013 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 ITPR3Q14573 2671 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 IGKV1-27A0A075B6S5 117 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 IGHV1OR21-1A0A087WYE8 117 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 IGHV3-20A0A0C4DH32 117 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 A0A1W2PPV4 95 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 C11orf94C9JXX5 98 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 HMGB3O15347 200 aaKnown RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 MPDU1O75352 247 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 CBR3O75828 277 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 CLDN1O95832 211 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 HPRT1P00492 218 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 MT-ND6P03923 174 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 SCTP09683 121 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 ESDP10768 282 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 PSG2P11465 335 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 ZNF32P17041 273 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 MDKP21741 143 aaPredicted RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 IL3RAP26951 378 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 PTGDSP41222 190 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 CDC34P49427 236 aaPredicted RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 XGP55808 180 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 COTL1Q14019 142 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 ZNF726P1Q15940 193 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 TMEM249Q2WGJ8 235 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 DEFB133Q30KQ1 61 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 SPANXN5Q5MJ07 72 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 FFAR4Q5NUL3 377 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 ZNF774Q6NX45 483 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 WDR74Q6RFH5 385 aaPredicted RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 TMEM14EPQ6UXP3 125 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 TEX43Q6ZNM6 134 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 SSX7Q7RTT5 188 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 AAED1Q7RTV5 226 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms