RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 PRRT1Q99946 306 aa10.25□□□□□ -0.77
HOXC6-203ENST00000504315 TMEM222Q9H0R3 208 aa10.25□□□□□ -0.77
HOXC6-203ENST00000504315 WFDC10AQ9H1F0 79 aa10.25□□□□□ -0.77
HOXC6-203ENST00000504315 RSL24D1Q9UHA3 163 aaKnown RBP10.25□□□□□ -0.77
HOXC6-203ENST00000504315 GPR132Q9UNW8 380 aa10.25□□□□□ -0.77
HOXC6-203ENST00000504315 C14orf166Q9Y224 244 aaKnown RBP10.25□□□□□ -0.77
HOXC6-203ENST00000504315 CEPT1Q9Y6K0 416 aa10.25□□□□□ -0.77
HOXC6-203ENST00000504315 A0A0G2JRQ6 117 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 RBMY1BA6NDE4 496 aaKnown RBP10.24□□□□□ -0.77
HOXC6-203ENST00000504315 RBMY1EA6NEQ0 496 aaKnown RBP10.24□□□□□ -0.77
HOXC6-203ENST00000504315 C15orf62A8K5M9 175 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 OR11H12B2RN74 326 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 OR5AC1P0C628 307 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 RBMY1DP0C7P1 496 aaKnown RBP10.24□□□□□ -0.77
HOXC6-203ENST00000504315 MFAP4P55083 255 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 TRIM16LQ309B1 348 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 ANKRD55Q3KP44 614 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 Q56UQ5 140 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 SLC16A13Q7RTY0 426 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 FAM219AQ8IW50 185 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 DEFB125Q8N687 156 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 LHFPL5Q8TAF8 219 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 GLYATL2Q8WU03 294 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 OR10C1Q96KK4 312 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 NAA60Q9H7X0 242 aa10.24□□□□□ -0.77
HOXC6-203ENST00000504315 CSMD3Q7Z407 3707 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 CRYM-AS1A6NIL9 109 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 SCAF4O95104 1147 aaKnown RBP10.23□□□□□ -0.77
HOXC6-203ENST00000504315 MT-CO2P00403 227 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 TNFSF8P32971 234 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 RELQ04864 619 aaPredicted RBP10.23□□□□□ -0.77
HOXC6-203ENST00000504315 Q6ZRM9 215 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 SLC35G3Q8N808 338 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 UBAC2Q8NBM4 344 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 RBPMSQ93062 196 aaKnown RBP10.23□□□□□ -0.77
HOXC6-203ENST00000504315 MISP3Q96FF7 219 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 SPAG8Q99932 426 aaPredicted RBP10.23□□□□□ -0.77
HOXC6-203ENST00000504315 HIPK2Q9H2X6 1198 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 SRD5A3Q9H8P0 318 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 SELENOKQ9Y6D0 94 aa10.23□□□□□ -0.77
HOXC6-203ENST00000504315 TEX13DA0A0J9YY54 714 aaPredicted RBP10.22□□□□□ -0.77
HOXC6-203ENST00000504315 CORTO00230 105 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 TSPAN4O14817 238 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 NUPL2O15504 423 aaKnown RBP10.22□□□□□ -0.77
HOXC6-203ENST00000504315 RNASE2P10153 161 aaKnown RBP10.22□□□□□ -0.77
HOXC6-203ENST00000504315 DHODHQ02127 395 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 BSXQ3C1V8 233 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 SPINK9Q5DT21 86 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 CASC10Q5T4H9 136 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 RBPMS2Q6ZRY4 209 aaKnown RBP10.22□□□□□ -0.77
HOXC6-203ENST00000504315 OR51S1Q8NGJ8 323 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 OR52B4Q8NGK2 314 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 OR52E5Q8NH55 327 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 MCFD2Q8NI22 146 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 RRNAD1Q96FB5 475 aaKnown RBP10.22□□□□□ -0.77
HOXC6-203ENST00000504315 GALNT14Q96FL9 552 aa10.22□□□□□ -0.77
HOXC6-203ENST00000504315 RBM38Q9H0Z9 239 aaKnown RBP10.22□□□□□ -0.77
HOXC6-203ENST00000504315 FABP12A6NFH5 140 aa10.21□□□□□ -0.77
HOXC6-203ENST00000504315 IFNA17P01571 189 aa10.21□□□□□ -0.77
HOXC6-203ENST00000504315 SELENOHQ8IZQ5 122 aaKnown RBP10.21□□□□□ -0.77
HOXC6-203ENST00000504315 TRIM63Q969Q1 353 aa10.21□□□□□ -0.77
HOXC6-203ENST00000504315 TMEM230Q96A57 120 aa10.21□□□□□ -0.77
HOXC6-203ENST00000504315 FAM110AQ9BQ89 295 aa10.21□□□□□ -0.77
HOXC6-203ENST00000504315 PDCD10Q9BUL8 212 aa10.21□□□□□ -0.77
HOXC6-203ENST00000504315 SCP2D1Q9UJQ7 156 aa10.21□□□□□ -0.77
HOXC6-203ENST00000504315 TMEM56-RWDD3S4R434 201 aa10.21□□□□□ -0.77
HOXC6-203ENST00000504315 AGRNO00468 2067 aa10.21□□□□□ -0.78
HOXC6-203ENST00000504315 SNCAP37840 140 aa10.2□□□□□ -0.78
HOXC6-203ENST00000504315 ETV6P41212 452 aa10.2□□□□□ -0.78
HOXC6-203ENST00000504315 HOXA1P49639 335 aaPredicted RBP10.2□□□□□ -0.78
HOXC6-203ENST00000504315 SUB1P53999 127 aaKnown RBP eCLIP10.2□□□□□ -0.78
HOXC6-203ENST00000504315 SPCS3P61009 180 aa10.2□□□□□ -0.78
HOXC6-203ENST00000504315 RNASE11Q8TAA1 199 aaKnown RBP10.2□□□□□ -0.78
HOXC6-203ENST00000504315 IL22RA2Q969J5 263 aa10.2□□□□□ -0.78
HOXC6-203ENST00000504315 PINX1Q96BK5 328 aaKnown RBP10.2□□□□□ -0.78
HOXC6-203ENST00000504315 C20orf24Q9BUV8 137 aa10.2□□□□□ -0.78
HOXC6-203ENST00000504315 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.2□□□□□ -0.78
HOXC6-203ENST00000504315 SMPXQ9UHP9 88 aa10.2□□□□□ -0.78
HOXC6-203ENST00000504315 IGHV3OR16-8A0A075B7F1 116 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 IGHV7-4-1A0A0J9YVY3 117 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 ZNF701M0R085 212 aaPredicted RBP10.19□□□□□ -0.78
HOXC6-203ENST00000504315 GNG7O60262 68 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 IGHV3-48P01763 117 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 NPBWR1P48145 328 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 KLF9Q13886 244 aaPredicted RBP10.19□□□□□ -0.78
HOXC6-203ENST00000504315 TMEM187Q14656 261 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 ZNF79Q15937 498 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 LAMTOR1Q6IAA8 161 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 DUSP18Q8NEJ0 188 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 GPR146Q96CH1 333 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 SCGB3A2Q96PL1 93 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 FNDC4Q9H6D8 234 aaPredicted RBP10.19□□□□□ -0.78
HOXC6-203ENST00000504315 RETNQ9HD89 108 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 V9GYH0 126 aa10.19□□□□□ -0.78
HOXC6-203ENST00000504315 CHEK1O14757 476 aa10.18□□□□□ -0.78
HOXC6-203ENST00000504315 ZNF207O43670 478 aaKnown RBP10.18□□□□□ -0.78
HOXC6-203ENST00000504315 LYL1P12980 280 aa10.18□□□□□ -0.78
HOXC6-203ENST00000504315 SUPT4H1P63272 117 aaKnown RBP10.18□□□□□ -0.78
HOXC6-203ENST00000504315 TMEM268Q5VZI3 342 aa10.18□□□□□ -0.78
HOXC6-203ENST00000504315 TMEM116Q8NCL8 245 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms