RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 PRR13Q9NZ81 148 aa13.53□□□□□ -0.24
SH3TC1-208ENST00000504223 IGHV3OR16-8A0A075B7F1 116 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 TEX13DA0A0J9YY54 714 aaPredicted RBP13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 MT-CO2P00403 227 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 CTSGP08311 255 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 ETV6P41212 452 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 HAGHQ16775 308 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 BTNL8Q6UX41 500 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 LINC00322Q6ZN03 302 aaPredicted RBP13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 CCDC190Q86UF4 302 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 UBAC2Q8NBM4 344 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 OR1L6Q8NGR2 347 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 NEURL2Q9BR09 285 aa13.52□□□□□ -0.25
SH3TC1-208ENST00000504223 INS-IGF2F8WCM5 200 aa13.51□□□□□ -0.25
SH3TC1-208ENST00000504223 GUCA2BQ16661 112 aa13.51□□□□□ -0.25
SH3TC1-208ENST00000504223 AARDQ4LEZ3 155 aa13.51□□□□□ -0.25
SH3TC1-208ENST00000504223 Q56UQ5 140 aa13.51□□□□□ -0.25
SH3TC1-208ENST00000504223 PVRIGQ6DKI7 326 aa13.51□□□□□ -0.25
SH3TC1-208ENST00000504223 MUC7Q8TAX7 377 aa13.51□□□□□ -0.25
SH3TC1-208ENST00000504223 CITED4Q96RK1 184 aa13.51□□□□□ -0.25
SH3TC1-208ENST00000504223 ATP6V0BQ99437 205 aa13.51□□□□□ -0.25
SH3TC1-208ENST00000504223 TUBA4BQ9H853 241 aa13.51□□□□□ -0.25
SH3TC1-208ENST00000504223 B3GALNT1O75752 331 aa13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 RNASE2P10153 161 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 ELLP55199 621 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 TMEM187Q14656 261 aa13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 ZNF57Q68EA5 555 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 SPSB3Q6PJ21 355 aa13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 SLC35G3Q8N808 338 aa13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 RBPMSQ93062 196 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 GPR146Q96CH1 333 aa13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 MCUBQ9NWR8 336 aa13.5□□□□□ -0.25
SH3TC1-208ENST00000504223 ZNF701M0R085 212 aaPredicted RBP13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 NDUFA4O00483 81 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 ZNF207O43670 478 aaKnown RBP13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 ATG12O94817 140 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 SCAF4O95104 1147 aaKnown RBP13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 IFNA17P01571 189 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 FCGR2BP31994 310 aaPredicted RBP13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 ERHP84090 104 aaKnown RBP13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 PYDC2Q56P42 97 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 TMEM268Q5VZI3 342 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 DEFB125Q8N687 156 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 MARC2Q969Z3 335 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 PINX1Q96BK5 328 aaKnown RBP13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 RRNAD1Q96FB5 475 aaKnown RBP13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 SPATA25Q9BR10 227 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 EDA2RQ9HAV5 297 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 PALMDQ9NP74 551 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 MRPL36Q9P0J6 103 aaKnown RBP13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 SCP2D1Q9UJQ7 156 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 UFC1Q9Y3C8 167 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 TMEM56-RWDD3S4R434 201 aa13.49□□□□□ -0.25
SH3TC1-208ENST00000504223 STARD9Q9P2P6 4700 aa13.48□□□□□ -0.25
SH3TC1-208ENST00000504223 DYNC2H1Q8NCM8 4307 aaKnown RBP13.48□□□□□ -0.25
SH3TC1-208ENST00000504223 DHODHQ02127 395 aa13.48□□□□□ -0.25
SH3TC1-208ENST00000504223 RNASE11Q8TAA1 199 aaKnown RBP13.48□□□□□ -0.25
SH3TC1-208ENST00000504223 GALNT14Q96FL9 552 aa13.48□□□□□ -0.25
SH3TC1-208ENST00000504223 C20orf24Q9BUV8 137 aa13.48□□□□□ -0.25
SH3TC1-208ENST00000504223 CACNG5Q9UF02 275 aa13.48□□□□□ -0.25
SH3TC1-208ENST00000504223 RBMY1BA6NDE4 496 aaKnown RBP13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 RBMY1EA6NEQ0 496 aaKnown RBP13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 RBMY1DP0C7P1 496 aaKnown RBP13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 HOXA1P49639 335 aaPredicted RBP13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 MFAP4P55083 255 aa13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 BSXQ3C1V8 233 aa13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 CASC10Q5T4H9 136 aa13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 FAM219AQ8IW50 185 aa13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 FNDC4Q9H6D8 234 aaPredicted RBP13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 DAZ1Q9NQZ3 744 aaKnown RBP13.47□□□□□ -0.25
SH3TC1-208ENST00000504223 OR11H12B2RN74 326 aa13.46□□□□□ -0.25
SH3TC1-208ENST00000504223 S100A5P33763 92 aa13.46□□□□□ -0.25
SH3TC1-208ENST00000504223 MLANAQ16655 118 aa13.46□□□□□ -0.25
SH3TC1-208ENST00000504223 TXN2Q99757 166 aa13.46□□□□□ -0.25
SH3TC1-208ENST00000504223 PDCD10Q9BUL8 212 aa13.46□□□□□ -0.25
SH3TC1-208ENST00000504223 SRRQ9GZT4 340 aa13.46□□□□□ -0.25
SH3TC1-208ENST00000504223 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.46□□□□□ -0.25
SH3TC1-208ENST00000504223 TRAV25A0A0B4J276 109 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 NXPH3O95157 252 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 AKR1C4P17516 323 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 SNCAP37840 140 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 SPCS3P61009 180 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 SLC16A13Q7RTY0 426 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 TOMM5Q8N4H5 51 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 OR52E5Q8NH55 327 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 TMEM170AQ8WVE7 144 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 HIPK2Q9H2X6 1198 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 SRD5A3Q9H8P0 318 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 RETNQ9HD89 108 aa13.45□□□□□ -0.26
SH3TC1-208ENST00000504223 K7EMT4 169 aa13.44□□□□□ -0.26
SH3TC1-208ENST00000504223 NUPL2O15504 423 aaKnown RBP13.44□□□□□ -0.26
SH3TC1-208ENST00000504223 NMSQ5H8A3 153 aa13.44□□□□□ -0.26
SH3TC1-208ENST00000504223 LYZL2Q7Z4W2 148 aa13.44□□□□□ -0.26
SH3TC1-208ENST00000504223 OR52B4Q8NGK2 314 aa13.44□□□□□ -0.26
SH3TC1-208ENST00000504223 IL22RA2Q969J5 263 aa13.44□□□□□ -0.26
SH3TC1-208ENST00000504223 OR10C1Q96KK4 312 aa13.44□□□□□ -0.26
SH3TC1-208ENST00000504223 SDHCQ99643 169 aaPredicted RBP13.44□□□□□ -0.26
SH3TC1-208ENST00000504223 LYSTQ99698 3801 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms