RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 CMTM3Q96MX0 182 aa10.31□□□□□ -0.76
POLR2J3-207ENST00000503564 YTHDF1Q9BYJ9 559 aaKnown RBP10.31□□□□□ -0.76
POLR2J3-207ENST00000503564 ZFAND3Q9H8U3 227 aa10.31□□□□□ -0.76
POLR2J3-207ENST00000503564 FAM212BQ9NTI7 297 aaPredicted RBP10.31□□□□□ -0.76
POLR2J3-207ENST00000503564 APOHP02749 345 aaPredicted RBP10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 TGFBR1P36897 503 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 TCTAP57738 103 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 TAS2R20P59543 309 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 PHLDA2Q53GA4 152 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 TMEM69Q5SWH9 247 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 TOMM20LQ6UXN7 152 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 FAM24BQ8N5W8 94 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 Q8NAQ8 132 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 S100A16Q96FQ6 103 aaKnown RBP10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 MS4A6AQ9H2W1 248 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 APLNQ9ULZ1 77 aa10.3□□□□□ -0.76
POLR2J3-207ENST00000503564 TRAV2A0A0B4J234 112 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 GNG7O60262 68 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 DFFBO76075 338 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 CD5P06127 495 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 GIG44P09565 113 aaPredicted RBP10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 HRH1P35367 487 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 DEFB131AP59861 70 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 PAFAH1B2P68402 229 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 TMEM187Q14656 261 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 LEMD1Q68G75 181 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 LYSMD2Q8IV50 215 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 OR6F1Q8NGZ6 308 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 GINS3Q9BRX5 216 aa10.29□□□□□ -0.76
POLR2J3-207ENST00000503564 ST8SIA3O43173 380 aa10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 HSPE1P61604 102 aaKnown RBP10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 NEDD8Q15843 81 aa10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 H2BFWTQ7Z2G1 175 aa10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 TBC1D26Q86UD7 250 aa10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 CROCCP3Q8IVE0 287 aa10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 OR4A16Q8NH70 328 aa10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 MRGPRFQ96AM1 343 aa10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 PINX1Q96BK5 328 aaKnown RBP10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 HRH4Q9H3N8 390 aa10.28□□□□□ -0.76
POLR2J3-207ENST00000503564 KIAA1109Q2LD37 5005 aa10.27□□□□□ -0.76
POLR2J3-207ENST00000503564 IGHV3-66A0A0C4DH42 116 aa10.27□□□□□ -0.77
POLR2J3-207ENST00000503564 A0A1B0GU03 582 aa10.27□□□□□ -0.77
POLR2J3-207ENST00000503564 EIF4EP06730 217 aaKnown RBP10.27□□□□□ -0.77
POLR2J3-207ENST00000503564 HLA-DMAP28067 261 aa10.27□□□□□ -0.77
POLR2J3-207ENST00000503564 PVRIGQ6DKI7 326 aa10.27□□□□□ -0.77
POLR2J3-207ENST00000503564 ZNF600Q6ZNG1 722 aa10.27□□□□□ -0.77
POLR2J3-207ENST00000503564 SAMD12Q8N8I0 201 aa10.27□□□□□ -0.77
POLR2J3-207ENST00000503564 GPX8Q8TED1 209 aa10.27□□□□□ -0.77
POLR2J3-207ENST00000503564 PUS1Q9Y606 427 aaKnown RBP eCLIP10.27□□□□□ -0.77
POLR2J3-207ENST00000503564 C11orf94C9JXX5 98 aa10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 DNASE2O00115 360 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 RBMY1A1P0DJD3 496 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 RBMY1CP0DJD4 496 aa10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 PRSS3P35030 304 aa10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 RBMY1FQ15415 496 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 IZUMO4Q1ZYL8 232 aa10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 SPINK9Q5DT21 86 aa10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 TRPT1Q86TN4 253 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 Q9H521 79 aa10.26□□□□□ -0.77
POLR2J3-207ENST00000503564 IGHV4-28A0A0C4DH34 117 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 IGLL5B9A064 214 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 INS-IGF2F8WCM5 200 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 K7EQG2 157 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 P0C879 139 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 C4BPBP20851 252 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 S100GP29377 79 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 RPS19P39019 145 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 NPBWR1P48145 328 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 UCP3P55916 312 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 ERHP84090 104 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 LPCAT3Q6P1A2 487 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 STHQ8IWL8 128 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 DUSP18Q8NEJ0 188 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 MRPL36Q9P0J6 103 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 X6R8D5 127 aa10.25□□□□□ -0.77
POLR2J3-207ENST00000503564 ZNF705EA8MWA4 302 aaPredicted RBP10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 ATP6V1G2O95670 118 aa10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 TMEM50AO95807 157 aa10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 IGKV1-5P01602 117 aa10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 HLA-DMBP28068 263 aa10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 TSPAN5P62079 268 aa10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 GRAMD2BQ96HH9 432 aa10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 TMEM231Q9H6L2 316 aa10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 RABAC1Q9UI14 185 aa10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 PCLOQ9Y6V0 5065 aa10.24□□□□□ -0.77
POLR2J3-207ENST00000503564 ELOA3CA0A087WX78 387 aaPredicted RBP10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 RNASE2P10153 161 aaKnown RBP10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 SPP1P10451 314 aa10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 MIFP14174 115 aa10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 RPL11P62913 178 aaKnown RBP10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 KCTD21Q4G0X4 260 aa10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 TMEM41BQ5BJD5 291 aa10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 MORN3Q6PF18 240 aaPredicted RBP10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 Q6ZTC4 211 aa10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 DCANP1Q8TF63 244 aa10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 FNDC4Q9H6D8 234 aaPredicted RBP10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 SCPEP1Q9HB40 452 aa10.23□□□□□ -0.77
POLR2J3-207ENST00000503564 IGHV4-4A0A075B6R2 117 aa10.22□□□□□ -0.77
POLR2J3-207ENST00000503564 A0A0B4J293 547 aa10.22□□□□□ -0.77
POLR2J3-207ENST00000503564 A0A1B0GVY2 172 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms