RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GNB2P62879 340 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 FOXE3Q13461 319 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 WDR25Q64LD2 544 aaPredicted RBP9.45□□□□□ -0.9
USP46-204ENST00000503060 HEPN1Q6WQI6 88 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 CBLN2Q8IUK8 224 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 RBMXL1Q96E39 390 aaKnown RBP9.45□□□□□ -0.9
USP46-204ENST00000503060 SNHG12Q9BXW3 62 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 CTSZQ9UBR2 303 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 ZFP30Q9Y2G7 519 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 HCFC1P51610 2035 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 IGHV1-69-2A0A0G2JMI3 117 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 SH2D7A6NKC9 451 aaPredicted RBP9.44□□□□□ -0.9
USP46-204ENST00000503060 PAGE4O60829 102 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 H1FXQ92522 213 aaKnown RBP9.44□□□□□ -0.9
USP46-204ENST00000503060 CLCC1Q96S66 551 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 ZNRD1Q9P1U0 126 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 KAAG1Q9UBP8 84 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 C1QTNF9P0C862 333 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 CT45A6P0DMU7 189 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 CT45A5P0DMU8 189 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 CT45A7P0DMV0 189 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 VDAC2P45880 294 aaPredicted RBP9.44□□□□□ -0.9
USP46-204ENST00000503060 UQCRFS1P47985 274 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 CDSNQ15517 529 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 ZNF726P1Q15940 193 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 VWC2Q2TAL6 325 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 ZNF429Q86V71 674 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 MBD3L1Q8WWY6 194 aa9.44□□□□□ -0.9
USP46-204ENST00000503060 C15orf61A6NNL5 157 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 K7ERU9 68 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 DVL1O14640 695 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 OR13C7P0DN81 318 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 FGF7P21781 194 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 POU2AF1Q16633 256 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 ZNF506Q5JVG8 444 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 DGAT2L7PQ6IED9 249 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 OR4A47Q6IF82 309 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 CLDND2Q8NHS1 167 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 HEYLQ9NQ87 328 aaPredicted RBP9.43□□□□□ -0.9
USP46-204ENST00000503060 TCF19Q9Y242 345 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 PKDREJQ9NTG1 2253 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 SPTA1P02549 2419 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 DOCK11Q5JSL3 2073 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 HRASP01112 189 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 SNRPCP09234 159 aaKnown RBP9.43□□□□□ -0.9
USP46-204ENST00000503060 LOXP28300 417 aaPredicted RBP9.43□□□□□ -0.9
USP46-204ENST00000503060 ICAM4Q14773 271 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 ZNF833PQ6ZTB9 187 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 MUC15Q8N387 334 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 C2CD4CQ8TF44 421 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 ARFGEF3Q5TH69 2177 aa9.43□□□□□ -0.9
USP46-204ENST00000503060 SRP19P09132 144 aaKnown RBP9.42□□□□□ -0.9
USP46-204ENST00000503060 EDN2P20800 178 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 TFF3Q07654 80 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 RTL8BQ17RB0 113 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 ZNF672Q499Z4 452 aaPredicted RBP9.42□□□□□ -0.9
USP46-204ENST00000503060 PYY3Q5JQD4 70 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 LCN15Q6UWW0 184 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 FOXA2Q9Y261 457 aaPredicted RBP9.42□□□□□ -0.9
USP46-204ENST00000503060 PMCHP20382 165 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 MDKP21741 143 aaPredicted RBP9.42□□□□□ -0.9
USP46-204ENST00000503060 CKS1BP61024 79 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 SOHLH1Q5JUK2 328 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 RXFP4Q8TDU9 374 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 TMEM14BQ9NUH8 114 aa9.42□□□□□ -0.9
USP46-204ENST00000503060 LOC102723971A0A1B0GUV8 181 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 F6UZH7 168 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 HSPB1P04792 205 aaKnown RBP9.41□□□□□ -0.9
USP46-204ENST00000503060 DLX6P56179 175 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 HSPE1P61604 102 aaKnown RBP9.41□□□□□ -0.9
USP46-204ENST00000503060 FABP9Q0Z7S8 132 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 OCIAD2Q56VL3 154 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 KHDC3LQ587J8 217 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 AWAT1Q58HT5 328 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 OR1L4Q8NGR5 311 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 RAB39BQ96DA2 213 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 SPTBN4Q9H254 2564 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 MAP1LC3B2A6NCE7 125 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 RRHO14718 337 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 IGKV1D-33P01593 117 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 IGKV1-33P01594 117 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 IL6RP08887 468 aaPredicted RBP9.41□□□□□ -0.9
USP46-204ENST00000503060 TMEM155Q4W5P6 130 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 C4orf48Q5BLP8 95 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
USP46-204ENST00000503060 TMEM204Q9BSN7 226 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 NPCDR1Q9BY65 106 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 MRPL20Q9BYC9 149 aaKnown RBP9.41□□□□□ -0.9
USP46-204ENST00000503060 MAP1LC3BQ9GZQ8 125 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 GNG13Q9P2W3 67 aa9.41□□□□□ -0.9
USP46-204ENST00000503060 LYNX1G3V0Z9 82 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 UPK2O00526 184 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 IGKV1-16P04430 117 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 LYNX1P0DP58 116 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 COL8A2P25067 703 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 TCTEX1D4Q5JR98 221 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 FFAR4Q5NUL3 377 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 ABHD12Q8N2K0 398 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 SMIM20Q8N5G0 67 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms