RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 TMEM116Q8NCL8 245 aa14.64□□□□□ -0.07
SFXN1-203ENST00000502393 TERB2Q8NHR7 220 aa14.64□□□□□ -0.07
SFXN1-203ENST00000502393 ZFAND1Q8TCF1 268 aa14.64□□□□□ -0.07
SFXN1-203ENST00000502393 PINX1Q96BK5 328 aaKnown RBP14.64□□□□□ -0.07
SFXN1-203ENST00000502393 RNF2Q99496 336 aa14.64□□□□□ -0.07
SFXN1-203ENST00000502393 RHPN1-AS1Q9BWJ2 59 aa14.64□□□□□ -0.07
SFXN1-203ENST00000502393 TRAV14DV4A0A0A6YYC5 116 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 A0A0B4J293 547 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 KIR2DL5BA0A0G2JN68 375 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 KIR2DL5BA0A0G2JPC4 375 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 GNG7O60262 68 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 CD74P04233 296 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 P0C879 139 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 AKR1C2P52895 323 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 IZUMO4Q1ZYL8 232 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 KIR2DL5AQ8N109 375 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 CCDC71LQ8N9Z2 235 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 KIR2DL5BQ8NHK3 375 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 COPZ2Q9P299 210 aa14.63□□□□□ -0.07
SFXN1-203ENST00000502393 SPRY2O43597 315 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 B3GALNT1O75752 331 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 IGHV3-48P01763 117 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 BMI1P35226 326 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 SNCAP37840 140 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 NPBWR1P48145 328 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 PPP5CP53041 499 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 TAS2R19P59542 299 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 SPINK9Q5DT21 86 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 SLC35G3Q8N808 338 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 OR4D10Q8NGI6 311 aa14.62□□□□□ -0.07
SFXN1-203ENST00000502393 GABARAPH6UMI1 98 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 ST8SIA3O43173 380 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 RAB3DO95716 219 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 IFNA17P01571 189 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 SUB1P53999 127 aaKnown RBP eCLIP14.61□□□□□ -0.07
SFXN1-203ENST00000502393 CMC4P56277 68 aaPredicted RBP14.61□□□□□ -0.07
SFXN1-203ENST00000502393 SSBP1Q04837 148 aaKnown RBP14.61□□□□□ -0.07
SFXN1-203ENST00000502393 TRIM16LQ309B1 348 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 SCGB2B2Q4G0G5 96 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 STPG3Q8N7X2 389 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 DUSP18Q8NEJ0 188 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 GALNT14Q96FL9 552 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 GINS3Q9BRX5 216 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 PDCD10Q9BUL8 212 aa14.61□□□□□ -0.07
SFXN1-203ENST00000502393 RGS5O15539 181 aa14.6□□□□□ -0.07
SFXN1-203ENST00000502393 CD5P06127 495 aa14.6□□□□□ -0.07
SFXN1-203ENST00000502393 UCP1P25874 307 aa14.6□□□□□ -0.07
SFXN1-203ENST00000502393 MRPS10P82664 201 aaKnown RBP14.6□□□□□ -0.07
SFXN1-203ENST00000502393 TNFRSF9Q07011 255 aa14.6□□□□□ -0.07
SFXN1-203ENST00000502393 SP6Q3SY56 376 aa14.6□□□□□ -0.07
SFXN1-203ENST00000502393 PVRIGQ6DKI7 326 aa14.6□□□□□ -0.07
SFXN1-203ENST00000502393 STEAP1BQ6NZ63 245 aa14.6□□□□□ -0.07
SFXN1-203ENST00000502393 OR13C8Q8NGS7 320 aa14.6□□□□□ -0.07
SFXN1-203ENST00000502393 RRNAD1Q96FB5 475 aaKnown RBP14.6□□□□□ -0.07
SFXN1-203ENST00000502393 MRPS26Q9BYN8 205 aaKnown RBP14.6□□□□□ -0.07
SFXN1-203ENST00000502393 C6orf62Q9GZU0 229 aaPredicted RBP14.6□□□□□ -0.07
SFXN1-203ENST00000502393 MIXL1Q9H2W2 232 aa14.6□□□□□ -0.07
SFXN1-203ENST00000502393 IGHV3-49A0A0A0MS15 119 aa14.59□□□□□ -0.07
SFXN1-203ENST00000502393 CORTO00230 105 aa14.59□□□□□ -0.07
SFXN1-203ENST00000502393 MEF2DQ14814 521 aa14.59□□□□□ -0.07
SFXN1-203ENST00000502393 DEFB135Q30KP9 77 aa14.59□□□□□ -0.07
SFXN1-203ENST00000502393 FAM90A2PQ658T7 463 aa14.59□□□□□ -0.07
SFXN1-203ENST00000502393 TOMM20LQ6UXN7 152 aa14.59□□□□□ -0.07
SFXN1-203ENST00000502393 GPR141Q7Z602 305 aa14.59□□□□□ -0.07
SFXN1-203ENST00000502393 MARCH1Q8TCQ1 289 aa14.59□□□□□ -0.07
SFXN1-203ENST00000502393 RNF183Q96D59 192 aa14.59□□□□□ -0.07
SFXN1-203ENST00000502393 A0A0J9YWU9 116 aa14.58□□□□□ -0.08
SFXN1-203ENST00000502393 RPL35AP18077 110 aaKnown RBP14.58□□□□□ -0.08
SFXN1-203ENST00000502393 ETV6P41212 452 aa14.58□□□□□ -0.08
SFXN1-203ENST00000502393 ALDH3B2P48448 385 aa14.58□□□□□ -0.08
SFXN1-203ENST00000502393 PAFAH1B2P68402 229 aa14.58□□□□□ -0.08
SFXN1-203ENST00000502393 ZNF600Q6ZNG1 722 aa14.58□□□□□ -0.08
SFXN1-203ENST00000502393 APRG1Q8IVJ8 170 aa14.58□□□□□ -0.08
SFXN1-203ENST00000502393 MAP6D1Q9H9H5 199 aa14.58□□□□□ -0.08
SFXN1-203ENST00000502393 ENY2Q9NPA8 101 aa14.58□□□□□ -0.08
SFXN1-203ENST00000502393 CTDSP2O14595 271 aa14.57□□□□□ -0.08
SFXN1-203ENST00000502393 CDS2O95674 445 aa14.57□□□□□ -0.08
SFXN1-203ENST00000502393 TMEM50AO95807 157 aa14.57□□□□□ -0.08
SFXN1-203ENST00000502393 RNASE2P10153 161 aaKnown RBP14.57□□□□□ -0.08
SFXN1-203ENST00000502393 HOXA1P49639 335 aaPredicted RBP14.57□□□□□ -0.08
SFXN1-203ENST00000502393 LYG2Q86SG7 212 aa14.57□□□□□ -0.08
SFXN1-203ENST00000502393 FAM219AQ8IW50 185 aa14.57□□□□□ -0.08
SFXN1-203ENST00000502393 RNASE11Q8TAA1 199 aaKnown RBP14.57□□□□□ -0.08
SFXN1-203ENST00000502393 TMEM222Q9H0R3 208 aa14.57□□□□□ -0.08
SFXN1-203ENST00000502393 PUS1Q9Y606 427 aaKnown RBP eCLIP14.57□□□□□ -0.08
SFXN1-203ENST00000502393 IGKV3-7A0A075B6H7 116 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 IGHV3OR16-13A0A075B7E8 117 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 IGHV3-74A0A0B4J1X5 117 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 ATF4P18848 351 aaPredicted RBP14.56□□□□□ -0.08
SFXN1-203ENST00000502393 TFPI2P48307 235 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 SPCS2Q15005 226 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 SURF2Q15527 256 aaPredicted RBP14.56□□□□□ -0.08
SFXN1-203ENST00000502393 TCF24Q7RTU0 167 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 SMIM4Q8WVI0 70 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 VSIRQ9H7M9 311 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 ZFAND3Q9H8U3 227 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 RABL2AQ9UBK7 228 aaPredicted RBP14.56□□□□□ -0.08
SFXN1-203ENST00000502393 RABL2BQ9UNT1 228 aa14.56□□□□□ -0.08
SFXN1-203ENST00000502393 C14orf166Q9Y224 244 aaKnown RBP14.56□□□□□ -0.08
SFXN1-203ENST00000502393 HYDINQ4G0P3 5121 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms