RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 NOL3O60936 208 aaKnown RBP12.06□□□□□ -0.48
NR1H3-227ENST00000498548 IFNA17P01571 189 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 OR5AC1P0C628 307 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 AKAIN1P0CW23 69 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 UCP1P25874 307 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 ETV6P41212 452 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 MFAP4P55083 255 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 SSBP1Q04837 148 aaKnown RBP12.06□□□□□ -0.48
NR1H3-227ENST00000498548 MEF2DQ14814 521 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 CASC10Q5T4H9 136 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 ZFAND6Q6FIF0 208 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 SPSB3Q6PJ21 355 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 BCL7BQ9BQE9 202 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 SLIRPQ9GZT3 109 aaKnown RBP12.06□□□□□ -0.48
NR1H3-227ENST00000498548 HIPK2Q9H2X6 1198 aa12.06□□□□□ -0.48
NR1H3-227ENST00000498548 C14orf166Q9Y224 244 aaKnown RBP12.06□□□□□ -0.48
NR1H3-227ENST00000498548 CCDC160A6NGH7 325 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 TNFSF8P32971 234 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 Q6ZRM9 215 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 SLC16A13Q7RTY0 426 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 SLC35G3Q8N808 338 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 ZNF114Q8NC26 417 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 OR51S1Q8NGJ8 323 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 RNASE11Q8TAA1 199 aaKnown RBP12.05□□□□□ -0.48
NR1H3-227ENST00000498548 LHFPL5Q8TAF8 219 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 C5orf66Q9H5L9 145 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 EDA2RQ9HAV5 297 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 UBQLN2Q9UHD9 624 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 GPR132Q9UNW8 380 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 TENM3Q9P273 2699 aa12.05□□□□□ -0.48
NR1H3-227ENST00000498548 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 TRAV25A0A0B4J276 109 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 TEX13DA0A0J9YY54 714 aaPredicted RBP12.04□□□□□ -0.48
NR1H3-227ENST00000498548 NUPL2O15504 423 aaKnown RBP12.04□□□□□ -0.48
NR1H3-227ENST00000498548 ATG12O94817 140 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 YIF1AO95070 293 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 LYL1P12980 280 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 SELENOHQ8IZQ5 122 aaKnown RBP12.04□□□□□ -0.48
NR1H3-227ENST00000498548 MCFD2Q8NI22 146 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 GLYATL2Q8WU03 294 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
NR1H3-227ENST00000498548 PDCD10Q9BUL8 212 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 NAA60Q9H7X0 242 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
NR1H3-227ENST00000498548 PRR13Q9NZ81 148 aa12.04□□□□□ -0.48
NR1H3-227ENST00000498548 ANKRD20A5PA0PJZ0 165 aa12.03□□□□□ -0.48
NR1H3-227ENST00000498548 FABP12A6NFH5 140 aa12.03□□□□□ -0.48
NR1H3-227ENST00000498548 GSTZ1O43708 216 aaPredicted RBP12.03□□□□□ -0.48
NR1H3-227ENST00000498548 HOXA1P49639 335 aaPredicted RBP12.03□□□□□ -0.48
NR1H3-227ENST00000498548 MLANAQ16655 118 aa12.03□□□□□ -0.48
NR1H3-227ENST00000498548 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
NR1H3-227ENST00000498548 ATP6V0BQ99437 205 aa12.03□□□□□ -0.48
NR1H3-227ENST00000498548 SOSTQ9BQB4 213 aa12.03□□□□□ -0.48
NR1H3-227ENST00000498548 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
NR1H3-227ENST00000498548 RYR3Q15413 4870 aa12.03□□□□□ -0.48
NR1H3-227ENST00000498548 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 K7EMT4 169 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 GNG7O60262 68 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 CDS2O95674 445 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 RNASE2P10153 161 aaKnown RBP12.02□□□□□ -0.49
NR1H3-227ENST00000498548 SNCAP37840 140 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 ANKRD55Q3KP44 614 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 TXN2Q99757 166 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 NXF2Q9GZY0 626 aaKnown RBP12.02□□□□□ -0.49
NR1H3-227ENST00000498548 GAR1Q9NY12 217 aaKnown RBP12.02□□□□□ -0.49
NR1H3-227ENST00000498548 RABL2AQ9UBK7 228 aaPredicted RBP12.02□□□□□ -0.49
NR1H3-227ENST00000498548 SMPXQ9UHP9 88 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 RABL2BQ9UNT1 228 aa12.02□□□□□ -0.49
NR1H3-227ENST00000498548 STAB2Q8WWQ8 2551 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 CRYM-AS1A6NIL9 109 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 NXPH3O95157 252 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 FCGR2BP31994 310 aaPredicted RBP12.01□□□□□ -0.49
NR1H3-227ENST00000498548 DHODHQ02127 395 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 RELQ04864 619 aaPredicted RBP12.01□□□□□ -0.49
NR1H3-227ENST00000498548 TMEM268Q5VZI3 342 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 LAMTOR1Q6IAA8 161 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 TMEM230Q96A57 120 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 RNF2Q99496 336 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 PRRT1Q99946 306 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 ENY2Q9NPA8 101 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 MCUBQ9NWR8 336 aa12.01□□□□□ -0.49
NR1H3-227ENST00000498548 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
NR1H3-227ENST00000498548 DYNC2H1Q8NCM8 4307 aaKnown RBP12□□□□□ -0.49
NR1H3-227ENST00000498548 IGKV3-7A0A075B6H7 116 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 LOC102724200A0A096LPH7 203 aaPredicted RBP12□□□□□ -0.49
NR1H3-227ENST00000498548 IGHV7-4-1A0A0J9YVY3 117 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 C15orf62A8K5M9 175 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 CHEK1O14757 476 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 TSPAN4O14817 238 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 B3GALNT1O75752 331 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 SURF2Q15527 256 aaPredicted RBP12□□□□□ -0.49
NR1H3-227ENST00000498548 TMEM116Q8NCL8 245 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 DUSP18Q8NEJ0 188 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 RBPMSQ93062 196 aaKnown RBP12□□□□□ -0.49
NR1H3-227ENST00000498548 SPAG8Q99932 426 aaPredicted RBP12□□□□□ -0.49
NR1H3-227ENST00000498548 RHPN1-AS1Q9BWJ2 59 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 CACNG5Q9UF02 275 aa12□□□□□ -0.49
NR1H3-227ENST00000498548 INS-IGF2F8WCM5 200 aa11.99□□□□□ -0.49
NR1H3-227ENST00000498548 TMEM50AO95807 157 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms