RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 AUNIPQ9H7T9 357 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 CELA1Q9UNI1 258 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 X6R8D5 127 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 ABCA13Q86UQ4 5058 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 PKD1P98161 4303 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 ZNF705EA8MWA4 302 aaPredicted RBP10.62□□□□□ -0.71
TRAF4-212ENST00000498540 GNG7O60262 68 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 CD5P06127 495 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 CLEC2LP0C7M8 214 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 RPL11P62913 178 aaKnown RBP10.62□□□□□ -0.71
TRAF4-212ENST00000498540 BORCS5Q969J3 196 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 PINX1Q96BK5 328 aaKnown RBP10.62□□□□□ -0.71
TRAF4-212ENST00000498540 MOB3AQ96BX8 217 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 CNBD2Q96M20 576 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 KRTAP4-5Q9BYR2 181 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 ZFAND3Q9H8U3 227 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 EHFQ9NZC4 300 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 RABAC1Q9UI14 185 aa10.62□□□□□ -0.71
TRAF4-212ENST00000498540 TRAV2A0A0B4J234 112 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 ANKRD65E5RJM6 399 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 M0R2N4 97 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 AMBPP02760 352 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 SDC2P34741 201 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 RFX2P48378 723 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 MXD1Q05195 221 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 ZNF767PQ75MW2 155 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 POM121L12Q8N7R1 296 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 ZNF114Q8NC26 417 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 TSPAN14Q8NG11 270 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 ZNF2Q9BSG1 426 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-212ENST00000498540 SCRT1Q9BWW7 348 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 FXYD6Q9H0Q3 95 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 CLEC5AQ9NY25 188 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 FKBP11Q9NYL4 201 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 BLOC1S6Q9UL45 172 aa10.61□□□□□ -0.71
TRAF4-212ENST00000498540 PUS1Q9Y606 427 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRAF4-212ENST00000498540 DYNC1H1Q14204 4646 aaKnown RBP10.61□□□□□ -0.71
TRAF4-212ENST00000498540 A0A0A6YYH2 397 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 A6NJ64 397 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 SPP1P10451 314 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 PSMB9P28065 219 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 CBX5P45973 191 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 SCAND1P57086 179 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 TMEM41BQ5BJD5 291 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 IDNKQ5T6J7 187 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 UBE2UQ5VVX9 321 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 DHRS11Q6UWP2 260 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 DUSP18Q8NEJ0 188 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 TSC22D3Q99576 134 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 RNF167Q9H6Y7 350 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 IFT46Q9NQC8 304 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 DNAH11Q96DT5 4516 aa10.6□□□□□ -0.71
TRAF4-212ENST00000498540 DEFB131BA0A096LNP1 70 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 A0A1B0GU03 582 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 K7EQG2 157 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 PRCDQ00LT1 54 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 C12orf74Q32Q52 190 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 MORN3Q6PF18 240 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-212ENST00000498540 ZNF600Q6ZNG1 722 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 CENPSQ8N2Z9 138 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 CSNK1G2-AS1Q8NCQ2 148 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 STXBP6Q8NFX7 210 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 SSR3Q9UNL2 185 aa10.59□□□□□ -0.71
TRAF4-212ENST00000498540 GPR31O00270 319 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 PMP2P02689 132 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 ZNF688P0C7X2 276 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 P0DMU3 169 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 FAM231AP0DMU4 169 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 FAM231CP0DMU5 169 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 PHLDA2Q53GA4 152 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 CMTM1Q8IZ96 169 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 SEC22AQ96IW7 307 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 DIABLOQ9NR28 239 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 TBC1D24Q9ULP9 559 aa10.58□□□□□ -0.72
TRAF4-212ENST00000498540 IGKV1-39P01597 117 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 IGKV1D-39P04432 117 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 GABARAPL2P60520 117 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 SPINK9Q5DT21 86 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 ACTL10Q5JWF8 245 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 IZUMO2Q6UXV1 221 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 ZNF575Q86XF7 245 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 OR4A16Q8NH70 328 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 GRAMD2BQ96HH9 432 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 TMEM231Q9H6L2 316 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 ANAPC10Q9UM13 185 aa10.57□□□□□ -0.72
TRAF4-212ENST00000498540 NPBWR1P48145 328 aa10.56□□□□□ -0.72
TRAF4-212ENST00000498540 LGALS9BQ3B8N2 356 aa10.56□□□□□ -0.72
TRAF4-212ENST00000498540 H2BFWTQ7Z2G1 175 aa10.56□□□□□ -0.72
TRAF4-212ENST00000498540 SPARTQ8N0X7 666 aa10.56□□□□□ -0.72
TRAF4-212ENST00000498540 OR5H2Q8NGV7 314 aa10.56□□□□□ -0.72
TRAF4-212ENST00000498540 DCANP1Q8TF63 244 aa10.56□□□□□ -0.72
TRAF4-212ENST00000498540 MRGPRFQ96AM1 343 aa10.56□□□□□ -0.72
TRAF4-212ENST00000498540 NDUFAF3Q9BU61 184 aa10.56□□□□□ -0.72
TRAF4-212ENST00000498540 TMEM50AO95807 157 aa10.55□□□□□ -0.72
TRAF4-212ENST00000498540 NPPCP23582 126 aa10.55□□□□□ -0.72
TRAF4-212ENST00000498540 P2RY1P47900 373 aa10.55□□□□□ -0.72
TRAF4-212ENST00000498540 PPP5CP53041 499 aa10.55□□□□□ -0.72
TRAF4-212ENST00000498540 HSPE1P61604 102 aaKnown RBP10.55□□□□□ -0.72
TRAF4-212ENST00000498540 ERHP84090 104 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms