RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 QSER1Q2KHR3 1735 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 UBR1Q8IWV7 1749 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 KIDINS220Q9ULH0 1771 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 LOC102724200A0A096LPH7 203 aaPredicted RBP5.43□□□□□ -1.54
SNX13-212ENST00000498463 PGPA6NDG6 321 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 TMEM235A6NFC5 223 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 FAM183AA6NL82 134 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 HMGB3O15347 200 aaKnown RBP5.43□□□□□ -1.54
SNX13-212ENST00000498463 CNMDO75829 334 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 NDUFB6O95139 128 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 IGLV3-25P01717 112 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 C8orf88P0DMB2 117 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 GPX2P18283 190 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 CLEC12BQ2HXU8 276 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 ARHGAP11BQ3KRB8 267 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 TMEM176BQ3YBM2 270 aaPredicted RBP5.43□□□□□ -1.54
SNX13-212ENST00000498463 TOMM20LQ6UXN7 152 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 SLC36A1Q7Z2H8 476 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 SLC35E3Q7Z769 313 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 ZNF584Q8IVC4 421 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 RNF175Q8N4F7 328 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 TCTEX1D1Q8N7M0 179 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 SMIM4Q8WVI0 70 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 PSMF1Q92530 271 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 MUCL1Q96DR8 90 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 MS4A6EQ96DS6 147 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 YPEL4Q96NS1 127 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 ADAT1Q9BUB4 502 aaKnown RBP5.43□□□□□ -1.54
SNX13-212ENST00000498463 VAMP8Q9BV40 100 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 PDFQ9HBH1 243 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 TAF9BQ9HBM6 251 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 ZNF586Q9NXT0 402 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 ZNF391Q9UJN7 358 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 TRAPPC2LQ9UL33 140 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 HDGFL3Q9Y3E1 203 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 NHSL1Q5SYE7 1610 aa5.43□□□□□ -1.54
SNX13-212ENST00000498463 BCORQ6W2J9 1755 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 TRBV24-1A0A075B6N3 115 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 MYBPHLA2RUH7 354 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 UMAD1C9J7I0 102 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 E7EQ34 232 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 TYMSP04818 313 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 TRGC1P0CF51 173 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 PRTN3P24158 256 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 FAM53BQ14153 422 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 IAH1Q2TAA2 248 aaPredicted RBP5.42□□□□□ -1.54
SNX13-212ENST00000498463 LINC00303Q3SY05 128 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 UBE2NLQ5JXB2 153 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 PRSS54Q6PEW0 395 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 TMEM91Q6ZNR0 172 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 WDR86Q86TI4 376 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 ZNF433Q8N7K0 673 aaPredicted RBP5.42□□□□□ -1.54
SNX13-212ENST00000498463 SRSF12Q8WXF0 261 aaKnown RBP5.42□□□□□ -1.54
SNX13-212ENST00000498463 PTH2Q96A98 100 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 GPR146Q96CH1 333 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 LINC01587Q99440 93 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 SND1-IT1Q9HBX3 110 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 FAM206AQ9NX38 181 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 LAMTOR2Q9Y2Q5 125 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 WSB1Q9Y6I7 421 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 COL1A1P02452 1464 aaPredicted RBP5.42□□□□□ -1.54
SNX13-212ENST00000498463 C5P01031 1676 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 SLIT2O94813 1529 aa5.42□□□□□ -1.54
SNX13-212ENST00000498463 TRAV8-3A0A0A6YYJ7 113 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 IGHV1-69-2A0A0G2JMI3 117 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 IGSF23A1L1A6 192 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 OR6C6A6NF89 314 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 ZNF705FA8MVS1 300 aaPredicted RBP5.41□□□□□ -1.54
SNX13-212ENST00000498463 KLLNB2CW77 178 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 C8orf87E5RJ46 101 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 ZNF705DP0CH99 300 aaPredicted RBP5.41□□□□□ -1.54
SNX13-212ENST00000498463 ZNF705BP0CI00 300 aaPredicted RBP5.41□□□□□ -1.54
SNX13-212ENST00000498463 PPIBP23284 216 aaKnown RBP5.41□□□□□ -1.54
SNX13-212ENST00000498463 SULT1A2P50226 295 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 FAM78BQ5VT40 261 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 CLEC20AQ6ZU45 233 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 FAM19A5Q7Z5A7 132 aaPredicted RBP5.41□□□□□ -1.54
SNX13-212ENST00000498463 MUC15Q8N387 334 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 LINC00471Q8N535 108 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 OR11G2Q8NGC1 345 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 CIRBP-AS1Q8TBR5 109 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 FXYD5Q96DB9 178 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 TCEAL2Q9H3H9 227 aaPredicted RBP5.41□□□□□ -1.54
SNX13-212ENST00000498463 TXNIPQ9H3M7 391 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 HHLA2Q9UM44 414 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 TMEM14AQ9Y6G1 99 aa5.41□□□□□ -1.54
SNX13-212ENST00000498463 TDRD6O60522 2096 aaKnown RBP5.4□□□□□ -1.54
SNX13-212ENST00000498463 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.4□□□□□ -1.54
SNX13-212ENST00000498463 IGHV3-49A0A0A0MS15 119 aa5.4□□□□□ -1.54
SNX13-212ENST00000498463 A0A1W2PRS3 328 aa5.4□□□□□ -1.54
SNX13-212ENST00000498463 ZNF207O43670 478 aaKnown RBP5.4□□□□□ -1.54
SNX13-212ENST00000498463 HLA-DQA1P01909 254 aa5.4□□□□□ -1.54
SNX13-212ENST00000498463 OPN1SWP03999 348 aa5.4□□□□□ -1.54
SNX13-212ENST00000498463 CTSEP14091 401 aa5.4□□□□□ -1.54
SNX13-212ENST00000498463 RPS4Y1P22090 263 aaKnown RBP5.4□□□□□ -1.54
SNX13-212ENST00000498463 S100A7P31151 101 aa5.4□□□□□ -1.54
SNX13-212ENST00000498463 GNG4P50150 75 aa5.4□□□□□ -1.54
SNX13-212ENST00000498463 TCTAP57738 103 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms